Phragmites australis (common reed): 133929416
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Entry
133929416 CDS
T10575
Name
(RefSeq) splicing factor U2af small subunit B-like isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
Spliceosome [BR:
paua03041
]
Complex A
U2 snRNP components
U2 related factors
133929416
Complex B
133929416
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NCBI-GeneID:
133929416
NCBI-ProteinID:
XP_062232142
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Position
9:34892311..34895699
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AA seq
379 aa
AA seq
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MFQSHSGPYRGKFTGILLVGDPKRFICFVNLVCFSCLCSFLSTLSCTLTTLIELYCQCES
YIMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMI
TPGVDAQGQPIDPEKMQEHFEDFFEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFSE
EEQAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGR
DLRRKLYGRSATRRYHGRSRSPSPRHRRGHRDRDDYHHDRDDYRGGGGGRGRGGRHDMYD
DRGGRGGRHDMYDDRGGRGGRHDRYDDGGVRSGRHDRYDDGGRRRHGSPPRRARSPVRES
SEERRAKIEQWNREREARQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttccaatcacacagtgggccgtacaggggtaaattcacaggaattttacttgttggt
gatcctaaaagattcatatgctttgtgaacctggtttgttttagctgcctgtgttccttt
ttgtctactttgtcttgcacactgacgaccttaattgagctttactgtcagtgtgagagt
tatatcatggcggagcacttggcttcgatctttggcactgagaaggatagggtcaactgc
cccttttacttcaagattggggcatgtcgtcatggggatcgctgctcccgtctgcacaac
aggccaaccatatcaccaactcttgtgcttgctaacatgtatcagcgccctgatatgata
acccctggagttgatgctcaaggccaacctattgatcctgagaagatgcaggagcatttt
gaggacttctttgaggacatctatgaggaactgggcaagttcggtgagattgagaacctg
aacgtttgcgataaccttgctgaccacatgattgggaatgtatatgtccagtttagtgag
gaagaacaggcagccgcagcatacaatgcacttcagggccgcttttactctggccgccca
ataattgtcgagtattctcctgtgactgacttccgtgaagcaacctgtaggcagtttgag
gagaacagctgtaaccgtggtggctactgtaatttcatgcatgtgaagcagattggcagg
gatcttaggaggaagctctatgggcgttccgctaccaggaggtaccatgggagaagccgc
agcccaagcccacgccacaggagaggccatcgtgatcgcgatgactaccaccatgaccgt
gatgattaccgtggtggtggtggtggacggggtagaggcggcaggcatgacatgtatgat
gacagagggggtagaggcggcaggcatgacatgtatgatgacagagggggtagaggtggc
aggcatgacaggtatgatgacggaggggttagaagtggcaggcatgacaggtatgatgat
ggaggaaggcgcaggcatggtagccccccaaggcgtgctaggagcccagtcagggaaagc
agtgaggagcgcagggccaagattgagcagtggaaccgtgaaagggaggcaaggcagtga
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