Phragmites australis (common reed): 133929506
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Entry
133929506 CDS
T10575
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133929506
Transcription machinery [BR:
paua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
133929506
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
133929506
NCBI-ProteinID:
XP_062232268
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Position
9:35903366..35905834
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AA seq
477 aa
AA seq
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MTSTVTTPSHPLAAGCRRSAGPTVLSFRGPRRRAPSTSCSALASPEKHSAAKLPLPPPPP
QDTATASRTDYSEVAAALESIYKLSPAVVEEKHDEDDKGDKAKKKMKGRVGRSTVIVRSR
RRQRGRRMDLGKRVEMKSREGDAGGKQEEEREFEAMLLREHSVSTDMGSLDWKRMKIPPV
LSSAQSARLFKTMQPMKAIFEVQESLRDELEREPTDAELAGATHMTVQQLRRRLDVGRAA
RNKLIKHNLRLVLYAINKYYPDMANDERFDDLCQAGANGLITAIDRFEPKRGFRISTYAL
FWIRHSIVRAMTLSNFTRFPFAMESERQEIYKAREELAFELGRAPTDEEVVKRVGISPAR
YRDVLRMTKPTYSLHSRNRVTQEELINEVTDDDAIGVDASKHNTLLRLAIDDLLDSLKPK
ENLVIRQRFGLDGRGKRTLSEIAGNLSISREMVRKYELKALMKLKHPTRVDYLRRYM
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgacgactcccagccacccgcttgccgccgggtgccgccgctcggcc
gggcccactgtgctctccttcagagggccacggcgacgggcgccgtccactagctgctcg
gcgctcgcgtcgcccgagaaacatagcgcggccaagctccctctgccgccgccgccgccg
caggacacggcaacggcgtcgaggacagactacagcgaggtggcggccgcgctggagagc
atctacaagctcagccccgccgtggtcgaagagaagcacgacgaggacgacaagggcgac
aaggccaagaagaagatgaagggcagagtgggaaggagcacggtgatcgtgaggagccgg
aggaggcagcgggggaggaggatggacctggggaagagagtggagatgaagagcagggag
ggggacgccggcggcaagcaggaagaggagcgggagttcgaggcgatgctgctcagggag
cattcggtgtccacggacatgggcagcctcgactggaagcgcatgaagatcccgccggtt
ctcagctcagcccagagcgcgcgcctcttcaagaccatgcagcccatgaaggcgatcttt
gaagtgcaagagagcttgcgggacgagctggagagggagccgaccgacgcggagctcgcg
ggggccacgcacatgaccgtgcagcagctgcggcgccgcctcgacgtcggccgtgccgcc
aggaacaagctcatcaagcacaacctccggctggtgttgtacgccatcaacaagtactac
ccggacatggccaacgacgagaggttcgacgacctctgccaggccggcgccaacggcctc
atcaccgccatcgaccggttcgagccgaagcgcggcttccgcatttcgacctacgctctc
ttctggatcaggcactccatcgtccgcgcaatgacgctctccaacttcacacggttcccc
ttcgccatggaatcggagaggcaggagatatacaaggccagggaggagctggcgttcgag
ctcgggagggcgcccacggacgaggaggtcgtcaagagggtggggatatctccggcgcgg
taccgcgacgtgctgaggatgacgaagccgacctactccctgcactcgcggaaccgcgtg
acgcaggaggagctcatcaacgaggtcaccgacgacgacgccatcggggtcgacgccagc
aagcacaacacgctcctccgcctagccatcgatgatctcctggactctctgaagcccaag
gagaacctggtgatcaggcagcggttcgggctggacggcagggggaagcgcacgctcagc
gagatcgccggcaacctcagcatctcgagggagatggtccgcaagtacgagctcaaggcc
ctgatgaagctcaagcatccgacacgagtggactacctccgcagatacatgtga
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