Phragmites australis (common reed): 133929519
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Entry
133929519 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133929519 isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133929519
Transcription machinery [BR:
paua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
133929519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
133929519
NCBI-ProteinID:
XP_062232287
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All DBs
Position
9:36020417..36023340
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AA seq
553 aa
AA seq
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MGLQMMHGRPCASSSSPSSSWMMQPQPPKQSHHPLSGRPISSESLALALHLLLRRHKRTC
ASLSGVLQITENKSSSSMKTKVNPERKALDDALDKNKQLGSLNKEMSYWMDLGYTNSNLQ
YSLLMQNLEELENSLAGKELVTLEKDILVHIEQLGALKSFNASMSMATLKQTSDESDCAL
LDKIIKFDPETPLKEQDTEVIVRSGKSQGRKLKRMRASEKGSGISVEVSKRKSRKLRKSS
SSQFISEWKNYPGRRRSIVREQSALLVTIKECANLEKIREKMIKEGQEVSYHRWAMVAGV
GEAELKSRLQAGYCSRERLLVTTEWLVKYIARTYTGMGTPFDDLLQAGKMGVLDGAEKFD
SQKGCKFSTYVKYWIRKGMLALLAENSGVTLLPARMESIIRKVKEARRAIRYSAGRNPSD
SEIATMVGVSVANVRLARKCSRRVASLYTEIGIGQNAKLAEVIPDTSLEAPDEAIFRSQL
RDRLLLVLDRLPAREGRVLKLRHGLEDGKCRSLEQIGGIYRVSKEWIRKIEKSAMAKLRN
EDVRRELSDFCGF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcagatgatgcatggcaggccctgcgcctcgtcctcgtcaccttcctcgtct
tggatgatgcagccccagccccccaagcagtctcaccatccattgagtggaaggccaatt
tcttctgaatcccttgcactggccttgcatctcttgctcagacgtcacaaaagaacttgt
gcatctttatccggagtgcttcaaatcacagagaacaagtcaagtagttcaatgaaaaca
aaggtgaatccagagagaaaggcccttgacgatgctcttgacaaaaataagcagcttggc
agtctgaataaagagatgtcttattggatggatttgggttacacaaacagtaatttgcag
tacagcttgttaatgcaaaaccttgaagagttggagaatagtttggctggtaaagagtta
gtaacgctggaaaaggatattctcgtgcatatcgaacagctcggagctctgaaatcgttc
aatgcgtccatgtccatggccaccctaaaacaaacctcagatgaatcagactgtgctcta
cttgacaaaattataaagtttgatccagagactcctctgaaggagcaggatactgaagtg
attgttcgaagtggcaagagtcaagggaggaaactgaaaagaatgagggcatcagaaaaa
ggatccgggatctccgtggaagtgtctaaacgaaaatcaagaaagttgcggaagtctagt
agtagtcagtttatatccgagtggaaaaactacccgggccgacgaaggagcattgtacgt
gaacaatcggcattgctagtgactatcaaggaatgcgcaaaccttgagaaaatcagagag
aaaatgataaaggaggggcaggaggtcagctaccacaggtgggcaatggtagctggagtt
ggtgaagcagagctgaagagcaggctgcaggcaggttactgcagtcgagagaggttgctg
gtgaccacagagtggttagtcaagtacattgcaagaacatacactggaatggggacgcct
ttcgacgatctacttcaggctgggaaaatgggcgtgcttgatggcgccgagaagttcgac
agccaaaaggggtgcaagttctccacatatgtcaagtactggatcaggaaagggatgcta
gctctcctggctgaaaattcaggagttaccctgctgcctgcaagaatggagagcataatc
cgcaaagtgaaggaggcgcggcgcgcaatccggtacagcgcagggaggaacccgtcagat
tcagagatcgccaccatggttggcgtgtcggtagccaacgtcagattggcgcgcaagtgc
tcccggagagttgcgtcactctacacagagattggaattggacagaacgcaaagttggcg
gaggtgattccggacacatctctggaggctccagacgaggccatcttccggagccagctg
agggataggcttctgctcgtgctggacaggctcccggcacgggaaggccgcgtgctgaag
ctgcggcacgggctggaggacggcaagtgcaggtcgctggagcagatcggcggcatctac
cgtgtgtccaaggagtggatcaggaagatcgagaagtcggccatggccaagctcaggaac
gaggacgtgcgtcgcgagctcagcgacttctgcgggttttaa
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