Phragmites australis (common reed): 133929535
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Entry
133929535 CDS
T10575
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
paua03012
]
133929535
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
eIF-5
133929535
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
133929535
NCBI-ProteinID:
XP_062232315
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All DBs
Position
9:complement(36119356..36125924)
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AA seq
1293 aa
AA seq
DB search
MGRKKSVAIDDDEYSFPQDDAADPAPPPPAAEKEKPKKGGKKGKKGGKAAVPDDDDYEPP
PPSLPAADEDDDEPVNLVFTGKKKKKKGGGAAVSSFSAFNALEEADEDKDEEEPTPASAE
PEADNDPADAEDDDLDFDFSKAKKKKKKKDKGARPAPDKDEDLDLDEPAPPPPAVAEMEE
EDAAPPAAKKSQKKKKKKGAFTTDDEDIVKLLAEIEEPPQPADEAGPEEVKGDDTVAAPD
VVDAAGKKSKKKKNKAGFTVDGEDIGKITAEIEDHPPPAEESEPTVVKDEGSVAAALTVD
DAEGKKSKKKKKKSGRTAEEEEELDKLLAVLGEAPPAEKEEKPAQATHSAAVAKEDVEAA
EDGNAEEKVGEGDVESAAAKKKKKKKEKEKEKKAAAKGAEAKKEEEKEQEAPKGKVDMKK
LPKHVREMQEALAKRKEAEERQKKEEEERLRKEEEERLRKEEEERKAEEAKRRKKEREKE
KLLKKKQEGKLLTGKQKEEAKRLEAMRRQFLEQSELQKAEGAAPETKKRPIYVSKKKKAQ
SKTTETAKVVEEQQQEVNEANNDDEEEYVLVDQESQSQVEESEEKTEPDQEIEEPQPEEE
EDEDEWDAKSWDDIDVNLPKTSAFDEEEAKPIVKKVAEPAQKQETSKTQPVIPAVIPPVA
NSKKSEMGDGGANNGNIKRNRGAASKKGPVKEDITKNGSDLRSPICCILGHVDTGKTKLL
DCIRHTNVQEGEAGGITQQIGATYFPTENIRERTKELKADATLKVPGLLVIDTPGHESFS
NLRSRGSSLCDIAILVVDIMHGLEPQTIESLNLLKSRDAVFIVALNKVDRLYGWKKCPNA
PIVKALKQQNEDVKREFNMRVTDIVTQFKMQGVNTALYYKNKEMEDTFNIVPTSAISGEG
IPDLLLLLVQWAQKTMEEKLTFVDEVQCTVLEVKVVEGHGTTIDVVLVNGILHEGDQIVV
CGMQGPIVTTIRALLTPHPMRELRVKGTYLHHKVIRAAQGIKISAQGLEHAIAGTALYLL
GPEDDLDKLNDAVMEEMTRVRSRIDKSGEGVYVQASTLGSLEALTEFLKSPAVNIPFCDF
SIGPVHKKDVMKASVMLERKKEYATILAFDVKVMPDARDLAEESGVRIFVADIIYHLFDQ
FTAYIKNLKEEKKKESAEEAVFPCVLKIMPNCVFNKKDPIVLGVDVLEGIAKVGTPLCIP
TKEFIDIGKIASIEINHKQVDMATKGQKVAIKVIANNSDEQQRSFGRHFDMEDELVSHIT
RRSIDILKQNYREDLSVDDWKLVVKLKAILKIQ
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagaagagcgtcgccatcgacgacgacgagtactccttcccgcaggacgac
gccgccgaccctgcgccgccgccgcccgccgcggagaaggagaagcccaagaagggcggc
aagaagggcaagaagggaggcaaggctgccgtgcccgacgacgacgactacgagccccct
ccgccgtcgctgcccgccgcggatgaggacgacgacgagccggtcaacctcgtcttcacc
ggcaagaagaagaagaagaagggcggcggcgccgccgtcagctccttcagcgccttcaac
gctctcgaggaggccgacgaggacaaggacgaggaggaacccacccccgcctccgccgag
ccggaggccgataacgaccctgccgacgccgaggacgacgacctcgatttcgatttcagc
aaggccaagaagaagaaaaagaagaaggacaaaggagctcgcccagcacccgataaagac
gaggatctcgaccttgatgagcctgctccaccgcccccagccgtggctgagatggaagag
gaggatgctgcgccccctgctgcaaagaaatcgcagaagaagaagaaaaaaaagggtgca
tttaccacggacgatgaggacatcgtcaagctcctcgctgagatcgaggaacctcctcag
cctgcggatgaagccgggcctgaggaggtgaaaggtgatgataccgtggctgcccctgat
gtggttgacgccgcaggaaagaaatcaaagaagaagaaaaacaaggcagggtttaccgtg
gatggtgaggatataggcaagatcactgcagagattgaggaccacccgcctcctgctgag
gagtctgagcccacggtagtgaaggatgagggctccgtggctgctgcactcactgtagat
gatgctgaagggaagaaatcaaagaagaaaaagaagaagagtggtaggacagcagaggaa
gaggaggagttggataagcttcttgctgtgcttggtgaagccccacctgcagagaaggag
gagaagccagcgcaggcaacacattctgctgcagtggctaaggaggacgtggaagctgca
gaggatggtaatgcggaggagaaggttggggaaggagatgtggaatccgctgcagccaag
aagaagaagaagaagaaggagaaggagaaggaaaagaaggcagcagcaaagggggcagag
gctaagaaagaggaggagaaggagcaagaggcgcctaaagggaaggttgacatgaagaag
ctcccaaagcatgttcgggagatgcaggaggcactcgcgaagaggaaggaagctgaggag
cggcagaagaaggaggaggaagagcgattgaggaaggaggaggaagagcgattgaggaag
gaggaggaagagaggaaagcggaggaagcaaagaggaggaagaaggagagggaaaaggag
aagctgctgaagaagaagcaggagggtaagctcttgactgggaagcagaaggaggaggca
aagaggttagaagccatgaggagacagttcctggagcagagtgaactccaaaaggctgag
ggtgctgcccccgagacaaagaagaggcctatatatgtttccaagaagaagaaagctcaa
tcaaagaccacagagactgcaaaggtagttgaagaacaacagcaagaggtcaatgaagct
aacaatgacgacgaagaagaatatgtgttggtggatcaggaatctcagtctcaggtggaa
gaatctgaagagaaaactgaacctgatcaggagattgaagagccacaaccagaagaagag
gaagatgaggatgaatgggatgcaaagagctgggatgatattgatgtgaatttgcccaaa
acaagtgcttttgatgaggaagaggcgaaacccattgtcaagaaggttgctgagcctgcc
cagaagcaggaaacttctaaaacacaacctgtgatacctgctgtcattcctcctgttgca
aactctaagaagagtgaaatgggtgatgggggtgccaataatggaaatattaagaggaat
agaggtgctgcctcaaagaaaggacctgttaaagaggatatcactaagaatggtagtgac
ctcagatcaccaatctgttgcatccttggtcatgtcgatactggcaagacaaagctgcta
gattgtattagacacactaacgtacaagaaggagaagctgggggtattacccagcagatc
ggagcaacatacttccctaccgaaaacattagagagagaaccaaggagttgaaagctgat
gctacacttaaggttccaggcctacttgttattgatacccctgggcacgagtccttcagt
aatctgcgttctagaggttcaagtttgtgtgatattgctattttggttgttgacatcatg
catgggcttgaacctcagacaattgaatccctgaatcttttgaagagtcgagatgcagta
tttattgttgctttaaataaggttgatcgtctttatggttggaagaaatgtccaaatgct
cctattgtgaaggctttaaaacaacaaaatgaagatgttaagagggagttcaatatgaga
gttaccgatattgtgacacaattcaagatgcaaggagtgaatactgctttgtactacaag
aacaaggagatggaagatacctttaacatagtgcctacaagtgcaataagtggtgaaggc
attcccgatttgcttctactattggttcaatgggcacagaagacaatggaagaaaagctt
acctttgttgatgaagtccagtgtactgtgctggaagtcaaggtcgtggaaggtcatggt
actacaattgatgttgtgttggtcaatggtatactgcatgaaggagatcaaatagttgtt
tgtggcatgcagggacccattgtgacaacaatcagagctttgttaacaccacatccgatg
agagagcttagagttaagggcacctacctacatcacaaggtgattagagctgcacaagga
ataaaaatatcagcgcagggtctcgaacatgcaatcgcagggaccgctctttacttgtta
ggacctgaggatgatttagacaaactaaatgacgctgttatggaagagatgacacgggtt
aggagccggattgataagagtggcgagggtgtctatgtacaggcatcaacacttgggtct
ttggaagctctcactgagttcttgaagagccctgctgtgaatattcccttctgtgatttc
agtatagggccagtccacaagaaggatgttatgaaggctagtgtgatgcttgagagaaag
aaagaatatgcaactatcttggcctttgatgtcaaagtgatgcctgatgcccgtgatctt
gcagaagagtctggtgtgaggatctttgtggcagatataatataccacctttttgatcaa
tttacagcatacattaagaatctcaaggaagaaaagaagaaggaaagtgctgaagaagct
gtgttcccttgtgttcttaagatcatgccgaactgtgtctttaacaagaaggatccaatt
gttttgggtgtcgatgtccttgaaggaatagctaaggtggggactcctctctgcataccc
actaaagaatttattgatattgggaagattgcctccattgaaattaatcataagcaagtt
gatatggccacgaaagggcaaaaggtggctataaaggttattgcaaacaattctgatgag
cagcagaggagtttcggcagacactttgatatggaagatgagcttgtcagccacatcaca
aggcgatctattgatattctgaaacaaaactacagggaggatttgtctgtggatgattgg
aaacttgtggttaagttgaaggccatcttgaagatacaatga
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