Phragmites australis (common reed): 133929540
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Entry
133929540 CDS
T10575
Name
(RefSeq) TATA-binding protein-associated factor BTAF1-like isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
paua Phragmites australis (common reed)
Brite
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133929540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133929540
NCBI-ProteinID:
XP_062232322
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All DBs
Position
9:complement(36161217..36184796)
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AA seq
2045 aa
AA seq
DB search
MAQSSRLHRLLTLLDTGSTQATRFAAARQIGEIAKSHPQELNALLKKVSQYTRSKNWDTR
IAAAHAIGVIAENVKHTSLKDLFASVEAEKQASGLSGTDDTGSALPCTDTTATSDLAFGS
FDINRVLEFGSPLLASGGQEYDVANDNGKNPAERLALQKQNLRRRLGLDVCEQFMDVNDV
IKDEDLLTQKNYWGSNVQNNGFHSYNTGHNIQQLVATMVPMYPRQSSFCSRRLSARELNM
LKRKAKSNAKDHTKAEDDEVALKSSASSNGASSDQVGAHNDAFDATVDEDNLEYSENGRW
PFEQFVDQLIHDMFDPIWEVRHGSIMALREIFTHQGACAGVYFPGPSFPSADLDDKTNFG
SRKRPHGIDLNEDVDVEHLEPVLKRHKEEPNPSEITCMDYGKELFNGDQLKTEAGLSMVL
TVSSGEPNSAHIKVEPESCVDGSIDPSKGDTTCATLHKTLNSVSNPSSLIHAPGNLKFSK
LMKLAKYSYMKNWEFHQDCAIRFLCVLSLDRFGDYVSDQVVAPARETCAQALGAVMKYMH
PSLVCHTLNTLLQMQRRQEWEVRHGSLLGIKYLVAVRQEMLKDLLDYVLHACKAGLEDPD
DDVRAVAAEALIPATASLVRLNDQMLHSIVMLLWDILFDLDDLSPSTSSVMNLLAEIYSQ
PEMVPKMLGTAALGEGREFDLNKVTQIAEQEDRLASSENPYGLATLTPRLWPFMRHSITS
VRRSAICTLERLLEVGNTRSSDGITPSKFWPTSILGDALQVVFQNLLLESNYEILQSSER
AWKLLLQCPEKDLESAARSYFSNWVQLATTPYGSILDSTKMFLPVALPRGSRSRVAAKIR
SARLEHENSRMISFVSTGESTSHEKHFDCPSSVSKIIVGADSEKSVTHTRVLTSMALGLF
ASKLPVGSWQVILTPLANDLMSLSGVQRQVASMVIVSWFKGLRSRDPVLVGTLLAFLSSV
KEWLLDLLTCSGPAFPTKDSVLPYTELARTYTKMRNEANNLLQSIDSCATFRDYVSSLNL
NVDVLSVDDAINFASNLLLPSESDLPSESEKIVLNNIESAKQGLLATSGYLKCVQNNLHV
TVSSLVASAVVWMSGLPSKLNPVILPLMAAIKREQEEVLQDKAADALAELIFSCVGRKPG
PNDKLMKNLCTLICTDASETPQAAVINSMQVIEDQNLLSIGKRFTSHKSRGHMTSGSEER
LKMEGFISRRGSELAFKHLCEKFGSSLFEKLPKLWGCLTEFLKPVKTKDGTLKDDLSIAQ
LGRSCEDKDPQSLINNIQIVRSITPYLSEPLKPQLLSFLPCILGCVRHPHVAVRLSAARC
ITSMAKSLTDEVMAIVIENVIPMLSDLSSVCARQGAGMLLSLLVQGLAVELVPYAPFLVV
PLLRCMSDPDGSVRQTVTHSFAALVPLLPLSKGVSLPGGLSERLSSSTEDVQFLEQLLDN
SQINDFKLNIDLSVELRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIA
ESRARNDDHDPTSLIICPSTLVAHWEYEIEKYIDSSVMKALQYIGSSQDRVMLRSQFDKF
NVVITSYDIIRKDIDFLGNISWNYCVLDEGHIIKNSRSKITSAVKQLKADHRLILSGTPI
QNNVLELWSLFDFLMPGFLGTEKQFQATYGKPLLAAKDSKCSAKDAEAGILAMEALHKQV
MPFLLRRTKDEVLSDLPEKIIQDRYCNLSLLQLKLYDKFSSSNAKEEISTIVKAKELEES
ASQPKATRHVFQALQYLLKLCSHPLLVTGENPSDHLVDILKEIGVGSGGELHELHHSPKL
VALQEILHECGIGSEISSPDASAAVGQHRVLIFAQHKAFLDIIEKDLFQSHMRSVTYLRL
DGSVELEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMKDLQAM
DRAHRLGQREVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENSSLETMNTDQLLDL
FTSTPASRKASVLRSSSSDDHSKNSKRKSGSKGLKSILNGLDELWDQSQYADEYDLNQFL
AKLNG
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcgtcccgtcttcaccgcctgctaacattactagacactggttcgacacaa
gctacaaggtttgcagctgcacgccaaattggagaaatcgccaagtcccatccccaggag
ctaaatgcgttgctaaaaaaggtttctcaatacactcgtagtaaaaattgggacacaagg
attgcggcagcccatgcgattggtgtgatagcagagaatgtcaagcacacatcattaaag
gacctgtttgcatctgtggaagcagaaaaacaagcttctgggctgtctggaactgatgat
actgggtcagcattgccatgtactgatactacagcaacatccgatcttgcttttggaagc
tttgacataaatagggtattggaatttggatctcctttattggcatcgggtggacaggaa
tatgacgttgcaaatgacaatggcaagaatccagctgagcgtctagctctccaaaagcaa
aatcttcggcgtcgtttaggactggatgtatgtgagcagtttatggatgttaatgatgtt
ataaaagatgaggatcttcttacccaaaaaaattactggggttcaaatgtacagaataat
ggatttcattcgtacaatactggccataatattcagcagttagttgccaccatggttcct
atgtatcccagacagtctagtttttgttcgaggcgattaagtgccagggagctcaatatg
ctgaagcgtaaagcaaagagtaatgcaaaagatcatacaaaggctgaggatgatgaggtt
gcactaaaaagttctgcatcatccaatggagcttcttctgaccaagttggtgcacataat
gatgcatttgatgcaactgtggatgaagacaatctggagtatagtgaaaatgggagatgg
ccttttgaacaatttgtggatcagcttattcatgatatgtttgaccctatttgggaagtt
cgccatggcagcattatggctttaagggaaatttttacacatcaaggtgcttgtgctgga
gtatattttcctggtccaagctttccttctgctgatttggatgataaaaccaactttggt
tcccgtaaaaggccacatggtattgatctaaatgaagacgttgatgtggaacacctcgaa
ccggttttgaagaggcataaggaagagccaaatccttctgaaattacatgtatggactac
ggtaaggagctgtttaatggtgatcaattaaaaacagaggcaggtctgagcatggtgctt
actgtatcaagtggtgaaccaaattctgctcacataaaagttgagccagagtcctgtgtt
gatggttcaattgatccctctaagggggatacaacatgtgcaacgttacacaaaaccctc
aactccgtatcaaatccgagttctcttatacatgctccaggaaatttgaaattttccaaa
ttgatgaagttggccaagtattcatatatgaagaattgggaatttcatcaagattgtgca
atccgcttcctttgtgtactttcattggatcgctttggtgattatgtatcggatcaagtg
gttgcccctgctcgtgaaacttgtgctcaagcacttggtgctgtgatgaagtacatgcac
ccttctttagtatgtcataccctgaataccttgctgcaaatgcagcgcagacaagagtgg
gaagttcgtcatgggagcctcctcggaattaagtacttagtcgctgttcgccaagaaatg
cttaaagatttgcttgactatgtccttcatgcttgtaaagctggtctggaggatccggat
gatgatgtccgagcagtggctgcagaagccctgatcccagctaccgcttctttggttaga
ctaaatgatcaaatgctgcattcaattgtgatgttgctttgggatatattgtttgacctt
gatgatctgagcccatctacaagcagtgtaatgaatttgctagcagagatatattctcaa
ccagagatggtcccaaagatgcttggaacagcagccttaggggaagggagagaatttgat
ttaaacaaagtgacacagattgctgagcaagaagacagattggcatctagtgagaaccct
tatggtctagccacactgacaccccgactatggccctttatgagacatagtatcacttca
gtccggcgttctgccatatgcacactggagaggcttcttgaggttggcaatactaggagt
tcagatggaatcaccccatctaaattctggcctacatcaatattaggtgatgcactgcag
gttgtcttccagaacctacttttggagtcaaattatgagattcttcagtcgtctgaaagg
gcttggaaacttctacttcagtgccctgagaaggaccttgagtcagctgcgaggtcatat
tttagtaattgggtacaacttgctactactccatatggctcaattttggattctacaaaa
atgtttttaccagttgcccttccacgaggaagtcgttcaagagttgctgcaaagatcaga
tctgcaaggctagaacatgaaaattcaagaatgatatcttttgtttctacaggggaaagt
acttcacatgaaaaacatttcgattgtccctcaagtgtttcaaagatcattgttggggct
gattctgaaaaatctgttactcatacacgggtgcttacgtcaatggcccttgggcttttt
gcctctaagttgccagtaggctcatggcaagttattcttactccactagcgaatgatctc
atgtctctctcaggtgttcagagacaggtggcttctatggttatcgtttcttggtttaaa
ggtctgagaagcagagatcctgtcttggttggtacattgctagctttcttatcttctgtg
aaagagtggctgctggacttattgacttgctctggccctgcatttcctacaaaagattct
gtgcttccatatactgaacttgcaagaacatacacaaagatgcgcaatgaagccaataat
ttgctccagtcaattgattcttgtgctactttcagagattatgtcagcagcttaaacctt
aatgttgatgtgttgagtgtcgatgatgctattaactttgcttcaaatcttttgttacct
tctgaatctgatcttccttcagaaagtgagaaaattgtcctgaataacatagaatcagca
aaacaaggtctgttggccacatcaggctatttgaaatgtgttcagaataatttgcatgtg
acagtttcttctttagtggcttctgctgtagtctggatgtcgggtttgcctagcaagttg
aacccagtcattttgcctttaatggctgccataaaaagagaacaggaagaagtacttcaa
gataaagctgctgatgcacttgctgagctcatttttagttgtgttggccgcaagcctggt
ccaaatgacaaactaatgaagaatctctgcacattgatatgcactgatgccagtgagaca
cctcaagctgcagttatcaactcaatgcaggttattgaggaccagaatttgctgtcaatt
ggaaagcgttttacaagtcacaaatccaggggtcatatgacttctgggagtgaagaaagg
ttaaaaatggaaggttttataagccgacgaggatcagaattagctttcaagcatctctgt
gagaaatttggatcatcattgtttgaaaaacttcccaaactatggggttgccttactgag
tttcttaagcctgtaaaaaccaaagatggcactctgaaagatgatctaagtattgcacag
ctaggcagatcgtgtgaggataaggacccacagtcgctcataaataatatccagattgtt
cgttcaattacaccttatttgtccgagcccttaaagcctcaactgctaagtttccttccc
tgtattcttgggtgtgtgcgtcatcctcatgtagctgttagattatctgctgcaaggtgc
atcacatcaatggcaaagtcattgactgacgaagtgatggcaatcgtgatagagaatgtt
attccgatgctgtctgatttatcttctgtctgtgcacgacaaggagctgggatgcttttg
agccttcttgttcaaggtttggctgtggagttggttccttatgctcctttcctcgttgtt
cctcttctgaggtgtatgagtgaccctgatggttctgttaggcagactgtgactcacagt
tttgctgctctggttcctttgctgccattatcgaagggtgtttcattaccaggtggacta
agtgaacgcttatctagcagcacggaagatgtgcagtttctggaacagctccttgacaac
tcccaaatcaatgatttcaagctcaacattgatcttagtgttgaattgcgaaggtatcag
caagaaggtatcaactggctagcattcctgaaacggtttaagttacatggaatcttatgt
gatgacatggggcttggtaagacgctccaagcatctgctattgtagcaagtgacattgct
gaatcacgtgcacggaatgatgaccacgatccaacatctttgattatctgcccttctact
ttagtggcccactgggaatacgaaatagaaaagtacatagacagctctgtcatgaaggct
ctccagtacattggttcatcacaggacagagtcatgctccgtagtcaatttgataagttt
aacgtagttataacatcatatgatattatacgcaaggatattgattttcttgggaatatc
tcttggaactactgtgttctggatgaagggcacataataaaaaactcaaggtctaaaata
acttctgctgtgaaacagctgaaagctgatcaccgccttatcttgagtggcactcctatt
cagaacaatgtattggagttatggtctttatttgacttcctgatgcctgggtttctcggg
acagaaaaacaattccaagctacatatggaaaaccattgctagcagctaaagattcaaaa
tgttcagcaaaggatgctgaagctggtattcttgcaatggaggcgctgcataagcaggtc
atgccatttctactcagaagaacaaaggatgaagttttatctgatcttccagagaagatt
atccaggatagatactgcaatctcagtttgttgcagctcaaactttacgacaaattctcc
agctccaatgcaaaagaggagatttcaactatagttaaagcaaaagaattggaggaatct
gcttctcaaccaaaggcaactcgtcacgtgtttcaggcattgcagtacctactgaaactc
tgcagccatcctttacttgtaactggggagaacccctcggatcatcttgtggatatttta
aaagaaataggtgtggggtctggtggtgagcttcatgagcttcaccactcacctaagctt
gttgctcttcaagagatacttcatgagtgtggtatagggtcagaaatatcaagtcctgat
gcttcggcagctgttgggcaacatagagttttgatttttgctcagcataaggcttttctt
gacatcattgagaaggatctgtttcaatctcatatgagaagtgtcacatatttgcggctg
gatggctctgttgaactagagaagagatttgaaattgtcaaagcgttcaattcagatcca
accattgatgtgcttctattaacaactcatgttggtggacttggcttgaatttgacatct
gctgatacattggtcttcatggagcatgattggaacccaatgaaggatcttcaggcgatg
gacagagcacaccgtttgggtcaaagggaagtggtgaatgttcaccgtctcatcatgcgt
ggaacccttgaggagaaggtgatgagtcttcagaggttcaaggtgtcagttgccaatgct
gtcattaatgctgagaactccagcttggaaacaatgaacactgaccagctacttgatctg
ttcacatctacccccgcttcgagaaaagcgtcggttctcagaagcagttcgagtgatgac
cacagtaaaaattccaagaggaaatctggtagcaagggcttgaagtccattctgaatggg
ctggatgagctttgggatcagtcgcagtacgccgatgagtatgatctcaatcagttcctg
gcgaagctcaacggctga
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integrated database retrieval system
