Phragmites australis (common reed): 133929590
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Entry
133929590 CDS
T10575
Name
(RefSeq) protein FIZZY-RELATED 3-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133929590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133929590
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
133929590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
MIOS_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_RIG_1st
Aldo_ket_red
Tricorn_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
133929590
NCBI-ProteinID:
XP_062232380
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Position
1:56030148..56033670
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AA seq
466 aa
AA seq
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MAADAKPRLNVPPSMAGVLRLEPVASPSPSRRLAETPKTPSPSKTTYSDRFIPCRSSSRL
HNFALLDTHTSPASKEDTPYSRLLRAELFGPDSPGPAPASPNTNLFRFKKDHSPFAAAAA
AAQQDCTAGSGETASPQKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNMLAVGLGTC
VYLWSASNSKVTKLCDLGPRDTICAVHWSREGSYLAIGTGLGDVQIWDSSRCKRIRNMGG
HQTRTGVLAWSSCILSSGSRDKNILQHDIRVPNDYISKFSGHRSEVCGLKWSHDDRELAS
GGNDNQLLVWNQRSQQPVLRLTEHTAAVKAIAWSPHQQGLLASGGGTADRCIRFWNTANG
NVLNSIDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVANLTGHTMRVLYLA
SSPDGQTIVTGAGDETLRFWNIFPSVKTQTPVRDIGLWSFSRSLIR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacgccaagccgcggctcaacgtgccgccgtccatggcgggtgtgctccgc
ctcgaacccgtggcgtcgccgtccccctcgcgccgcctcgccgagacccccaagacgccc
tccccctccaagaccacatacagcgatcgattcatcccctgccgatcctcctcccgcctc
cacaacttcgccctcctcgacacccacacctcaccagcctccaaggaggacaccccctac
tcccgcctcctccgcgccgagctcttcggccccgactcccctggacccgcccccgcatcg
cccaacacaaacctcttccgcttcaagaaagaccactcccccttcgccgccgccgccgcc
gccgcacagcaggactgcacagcgggatccggagagacggcctcgccacagaagccaccc
aggaaggttcccaagacgccgcacaaggtgttggacgcgccgtccctgcaggacgacttc
tacctcaacctcgtcgactggtcgtcgcagaacatgctcgccgtcggcctcggtacttgc
gtctacctctggtccgcgtccaacagtaaggtgaccaagctctgcgatctggggccgagg
gacaccatctgtgccgtgcattggtcacgagaaggatcttatcttgccattggcaccggc
cttggagatgtccagatttgggacagctcccgctgtaaaaggattaggaacatgggaggt
caccaaacacggactggggtattagcatggagctcgtgcatcttgtcctccggtagcagg
gacaagaacatattgcagcacgacatccgtgttcccaacgactacatcagcaagttttct
ggtcacagatcagaggtttgtggactcaaatggtcacatgacgaccgcgagcttgcttct
ggtggaaatgacaaccagctactagtatggaaccaacgatcgcaacagccagtgttgcga
ttgactgaacatacggctgcggttaaagcaatagcgtggtcaccacatcagcaaggcctc
ctggcatcaggaggtggaacagctgataggtgtatcaggttctggaacacagctaatgga
aatgttctgaactcaattgacacaggcagccaggtttgcaaccttgcctggtgtaaaaat
gtgaatgagctcgtgagcacacatgggtattcccaaaatcaaatcatggtgtggaaatat
ccgtctatgtcaaaggttgcaaatctaaccggacatacaatgcgggtgctttatcttgca
tcgtcgcctgatggccagaccatagtaacaggagcgggcgacgaaactcttagattctgg
aacattttcccttcagtgaagacgcagactcctgttcgtgatattgggctctggtcattc
tcaagaagcctcatccggtga
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