Phragmites australis (common reed): 133929775
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Entry
133929775 CDS
T10575
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133929775
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133929775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
BUD22
Motif
Other DBs
NCBI-GeneID:
133929775
NCBI-ProteinID:
XP_062232560
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Position
1:4815280..4820249
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AA seq
749 aa
AA seq
DB search
MASRVTPSKRPFQKNSSDHNIRGKWKKTKHASSQHAQLKIRPGVPIFRILCPASKSGNII
GKGGGVIAKIRQETGVKITVEEAVHGCDERVIVITAIEKDKETSRELDAENDGGFTVSAG
GDHEKDKDNSKEKKDDSEKDHSKEEKDDSEKDHSKGEKDGSEKGNSKEENDDSEKDNSKE
KNGDPEKDNSKEEKDNSEKDHHKEEKDGSEKDHSKEEKDDPFVAKDTKSEPEREIPSALK
AIFLVFDRIFATEDENETGNASGARTPVSLRLLVLYSQAGWLLGKSGSVIKQMSVDNGCE
IRVSRDRLPPCALSQDRLCQITGEVDSVRKGLNAVAEVLFAHLPKESDIASGVHPSGSSS
HSLFSRSDGLHSGMQSNFHIPFQGPSQANGPYDIIDIRPNIAPFPTLPEAPIHGHASVPV
EPLTFRLLCSKDKVGSIIGRGGNVVNSIQNDTGCEIKVLETVPKSENRLISISGPAHPGD
GISPAQNAILHVQRKIALPTYDKEEGPAICRLIVLPNQVGCLLGKGGSIIAEMRKLSGAH
IVVLSKDKIPRGVPQNDEVIQISGDCEAIQEALMQITARLRNHLFRDRMPAVGPNMPPFG
LLDSQFGPHTGNHESSSLFHKDFMGRPLDGISAPWNAKGMHDVGDPMSISDIPGAAHRGL
GAFSGPGQSSMMPNLTAEVLVPRLAIPALCGEDGGCLDKIREFSEAKIAVTEPIAEAMDA
AILISGTPDQMHAARSLIQAFVISESFAP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacgcgtgacaccttctaagaggccgtttcagaagaattcttcagaccacaac
atccggggcaagtggaagaagacaaagcatgcttcttcacagcatgctcagctgaagata
cggcccggtgttcccatttttcgcattctttgccctgcttcaaaatctggaaatataatt
ggtaaaggaggcggtgtcattgccaagatacggcaagaaaccggagtgaaaattacggta
gaggaagcagtccatggttgtgatgagagagttattgtcataactgccattgagaaggat
aaagaaactagccgtgagctagatgcagagaacgatggaggttttactgtttccgctggt
ggtgaccatgagaaggataaagacaacagtaaggagaagaaggatgattcagagaaagac
cacagtaaggaggaaaaggatgattcagagaaagaccacagtaagggggaaaaggatggt
tcagagaaaggcaatagtaaggaggaaaatgatgattcagagaaagacaacagtaaggag
aaaaatggtgatccggagaaagataatagtaaggaagaaaaggataattcggagaaagac
catcataaggaagaaaaggatggttcagagaaagaccacagtaaggaagaaaaggacgat
ccatttgtagcaaaagatacaaagtcagaaccggagagggaaataccatcagcgttgaag
gccatttttcttgtatttgataggatttttgcaactgaagatgaaaatgaaaccgggaat
gcatcaggtgcgagaactcctgtttctttacgtttattggtgctatacagccaagcaggt
tggcttttggggaagagcggtagcgtgattaagcaaatgtcagttgataatggctgtgaa
atccgtgtttcaagggataggcttccaccatgtgcgttatcccaagacagactttgccag
atcactggagaggttgactcagtacggaaaggtctgaatgcagtagctgaagtgctcttt
gctcatctacccaaggaaagcgacatagcttctggtgttcatccttctggatcatcatcg
cactctttgttcagtcggtcagatggtcttcattctggaatgcaatctaacttccatatt
ccttttcaagggccatcccaagccaatggaccttatgatataattgacattcggccaaat
attgctccatttcccactttgcctgaagctccaatacatggccatgcctcagttcctgta
gaacccctcacatttaggttactgtgttcaaaagacaaggttggcagtataatagggagg
ggtggaaatgttgtcaatagtattcagaatgatacaggctgtgaaataaaagttcttgag
actgttccaaaatcagaaaaccgcctcataagtatatctggacctgcgcatcccggtgac
ggaatttcccctgctcagaatgcaattctgcatgtgcagcgtaaaattgcgttgcctacc
tatgacaaggaggagggtcctgcaatatgtaggctgatcgttttgcctaaccaagttggt
tgccttctgggcaaaggtggtagtatcatagctgaaatgcggaagctatcaggagctcat
atagtagtgctgagcaaagataagatcccaaggggtgtcccacaaaatgatgaagttatt
cagataagcggggactgtgaagctattcaagaagctctaatgcagataactgctaggctt
cgtaaccatctgttccgggacagaatgcctgcagtgggtcctaatatgccaccttttggt
ttgctagattctcaatttggtccacacacgggaaaccatgagtcttcatctctgtttcat
aaagattttatgggacggccattggatgggatctctgctccttggaacgcaaagggtatg
catgatgttggtgatccaatgtcaatatctgatatcccaggagcagcgcatagaggactt
ggtgcattttctggtcctggccagtcatctatgatgccaaacttaactgcagaggtcttg
gttccaagattagctattcctgctctctgtggggaagatggaggttgtttggataagatc
cgtgagttttcagaagctaagatagcagtcactgaacctatagctgaggctatggacgct
gctattctaatatctggcacaccagaccagatgcatgcagcccgaagtcttattcaagca
tttgttataagtgaatcatttgccccatga
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