Phragmites australis (common reed): 133929930
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Entry
133929930 CDS
T10575
Name
(RefSeq) paired amphipathic helix protein Sin3-like 6
KO
K11644
paired amphipathic helix protein Sin3a
Organism
paua
Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133929930
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
133929930
REST complex
133929930
Heterochromatin formation proteins
Other heterochromatin formation proteins
133929930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3_corepress
Sin3a_C
PAH
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
133929930
NCBI-ProteinID:
XP_062232671
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All DBs
Position
9:complement(35982101..35987235)
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AA seq
839 aa
AA seq
DB search
MEAVRFLILAKEELGDYAYNELIKTVQEIVKRSANPDSGITIQKCEEILSEVFDGQTRLL
KSFNHFLEARDPFHDDMLPDPNAFLAKVKASPYICDEDYNDFLTTLCQFRTTRTMTVEDV
YEKAKRIMRQCPELIEIFKTYLPPHLRVPVPNKQYCGIPKTSPMNKAVLSFTPDANHSLD
GIRMKATNIKNNVSQMDYHFNQNHKGIEYSFRQKHTQRIPDSFQMPTREGNGESLHAEEY
EGDKIDPLPDWSPSRENELPPKVDLNICPRCTPSCYLLPENCSTLQSSYRTELGRSIFND
TLVCSTSGSEGCFKFRTKNKYEEKIFKCEDDMFESDMLLQRFRATADFIGNLQDHVDSDT
KIQEHLSPLHRRCIEQLYDDCGLDVLDALSESQYTSASLVVLHSRLNQKMENLSEARLSL
HKMCSNIIANNYHRSLDHRSSSFKQLDTRRMSTKALLAEAKEITRSVSDDATDLRIHEDI
DSIVRDESRRSFPSEHKLLMMIWTKLVHPFVSANCQLPELNVTVAPREDCDGCGLSKNFL
NSIHDALLANNFSFSSKRGECFGNTCNKSSSIHDEIEGEFIPDIENIQLDAMLGPVNRAA
NYDVAAPSGDGPTFRCPELSVCDHGNKSKGQHESREGSNIEMYSLAYFKRISELPDVKGG
IPCCSLVVLCRLHQILYERLLVAKVLSREASSKALSRGSRSCDLYAEFQVKLFELLEGST
DNSNFEKYCLNFLGPRSYILFTLDKLICQLMKELCSICPADEDNFLIQPNEKVRRPNLSK
DLLHHQNARSSPARPTNGSLEQDREEREKGRKPLDDTVKPTQNHFQRRKKPKLENGAAS
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgcggttcctcatccttgctaaggaggaactcggagactatgcgtacaac
gagctcatcaagaccgtgcaggagattgtgaaacgaagtgcaaatcctgacagtggaatc
acgatccaaaaatgtgaagaaattctgtccgaggtgtttgatggccagactcgcctccta
aagagcttcaatcactttcttgaagcgcgtgaccccttccacgacgatatgctgccggac
ccaaacgctttccttgcgaaagtgaaggcatccccttatatatgtgatgaagattataat
gatttcctgaccaccctgtgtcagtttaggaccacaaggaccatgactgtagaagatgtt
tatgaaaaggcaaagagaatcatgcgtcagtgtcctgagttaatagagatcttcaaaact
tacctgcctcctcacctaagggtgcctgtaccaaataagcaatactgtgggattccaaag
actagtccaatgaacaaggcggttttaagctttactccagatgctaatcacagcttggat
ggtatccgaatgaaagcaaccaatatcaagaataacgtgtctcaaatggattatcacttc
aaccaaaaccataaaggaatagagtacagtttcaggcagaaacacactcagaggatccct
gactcctttcaaatgcctacaagggaaggtaatggagaatcacttcatgcagaagagtac
gagggagacaagattgatcccttgccagactggagtccctcaagagaaaatgaattacct
ccgaaagtggacctcaatatctgcccacgttgcactcctagctgttacctactaccagaa
aattgttcaactctccaatcaagttaccggactgaactgggacggtctatttttaatgac
acgttggtttgttctacctctgggagtgagggttgctttaagttcagaactaaaaataaa
tatgaagaaaagattttcaaatgcgaagatgacatgtttgagagcgacatgctgttgcag
cgctttagagcaactgctgacttcattggaaatctccaagaccatgttgacagtgataca
aaaattcaagaacatttaagtccgttacataggaggtgcattgaacagctatatgatgat
tgtggcctcgacgtgcttgatgctctgtcggagagtcagtataccagtgcttctcttgtt
gttctgcattctcgcttaaatcagaagatggaaaatttgtcggaggcacggttatctttg
cataaaatgtgctcaaatattattgcgaataattaccacagatcacttgatcatcgcagc
tcctccttcaaacaattggacacaaggcggatgagcacaaaagctttgcttgctgaagcc
aaagagatcacgcgttcagtttcagacgatgctactgatcttcgcatccatgaggacata
gacagcatcgttcgtgatgaatctcgtagaagttttccttctgaacataagctgctgatg
atgatttggacaaaactagtgcatccatttgtttctgctaattgtcagttgccagagttg
aacgttactgtagctcccagagaagattgtgacggttgtggtctcagcaaaaatttcctc
aatagcatccatgatgctttgcttgctaataatttttctttttcttcaaagagaggtgaa
tgttttggaaatacgtgtaataagtcttcttctatacatgatgagattgagggtgagttc
atacctgatatagaaaacatccaattggacgccatgcttggacctgtgaacagagcagca
aattatgatgttgctgctcccagtggagatgggccaactttccggtgcccagaacttagt
gtttgtgaccatggtaataaatctaaagggcagcatgaatcaagagaaggctccaatatc
gaaatgtacagtttagcatatttcaaaagaatatctgaattgcctgacgtaaaaggtggc
ataccttgttgttctctggttgtgctctgcaggcttcaccagattttgtatgagagactg
ctagtcgcaaaggttctctcgagagaagcaagttctaaagctctctcccgaggttcacgc
agctgtgatttatatgcagagtttcaggtgaaactctttgagctgcttgagggctctact
gacaattccaattttgagaagtattgcctgaatttccttgggccgagatcatatatactg
tttactctggataagcttatatgtcaacttatgaaggagctttgcagcatttgtccagct
gatgaagacaacttccttattcagcccaatgagaaagtgagaagaccgaacctgtccaaa
gatttattacaccatcaaaatgcaagaagctctccagctcgtccaacaaatgggtcgctg
gagcaagatagagaggagagagagaaaggtaggaagcctcttgacgatactgttaaaccg
acgcaaaaccattttcagagaaggaaaaagcccaagttggagaacggtgcagcgagttga
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