Phragmites australis (common reed): 133930028
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Entry
133930028 CDS
T10575
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 19-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133930028
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133930028
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133930028
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133930028
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133930028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
133930028
NCBI-ProteinID:
XP_062232701
LinkDB
All DBs
Position
10:complement(7585476..7593038)
Genome browser
AA seq
1041 aa
AA seq
DB search
MLGGGGGGAGLGLDLSAVIQAAVVGIVLFSAAVIAVRRAASRYFVVDAAGFAASYDDHHH
HTSSAYPMPSQENQQEGPAGDETGPCAKCGGLASKKCSGCKRVRYCSQECQTKHWQTDHK
FKCKQIKFLDPADKLSCGGEANNKKSSGFGRISLVSARKKLNKVLFPYDEFLKLYYWKDF
DFVPCGLMNCGNSCFANVVLQCLSCTRPLVAYLLGKDHSRECSMRHEEWCFLCELQCHIQ
RANESLHPFAPMNILSHLPNIGGNLGFGRQEDAHEFMTFAIDKMQSACLDEYGGEKAVDL
SIQETTVVQHIFGGRLQSQVQCTACGMVSNRYDNMMDLTVEIQGDAESLEKCLDQFTAVE
WLDGDNKYKCDGCNDYVKARKHLSVHQAPNILTVTLKRFQSGRFGKLNKRVTFPMELDLT
SYMSSTDGSDLYDLYAVVVHLDMLNASFFGHYICYIKGYRGSWYKIDDHKVMIVDEEEVH
AQGAYTLLYSRRMARPRPLIAVEELVKQQQQCMVLPSNGQNYPIPEDTTLTCESPSKSSE
DLLKQDSEFNNESLHKMDIKDLESDLDLHISIEGDKSNGNENLHSPGSPVSHVLEDTGAP
GSQLEGSTSMRSVQFDPPLEGGPTTLSSVQFGNSTSEASSVHSFAEQCEXPVSCIDSVDY
MRVDTEAGAEVERWNERPSVLDDSIGRTDNETSAPTLANGMAGKPKPLFSRGFLDKPSRK
RSSFPEEGHIGGNSAGSSRKLNGHCKEHLNSSEKGVLVNSCGGNPSSGSGKCNGDMIATS
SNGNYYAVNGDKQSSNDSLHASKRDVPFVSDGFNPRPYREPSDINTNCSNTSSGKPLKAC
QGDMSFLHRGFLERPCSRGQSVKVEEGLAFSNGTSSSFVNGNIKSSNNSSSRTGLSPGFL
TRHCRESAVLCTSASCMHGLETSSNISMEHKSKGTAVALDHIEDRWSSDCRTNGSLLQLR
ASNDNAIDHLGENGHAILTIENTSCEQVNGSNGTTDVNGVGHQRDGAPAMLVSEKSMGSE
HDGLRRRVTSKYFEQNGIDAK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgctggggggcggcggcggtggcgcgggcctgggactggacctctcggcggtgattcag
gcggcggtggtcgggatcgtgctgttctcggcggccgtcatcgccgtgcgccgcgcggct
tcgcgctacttcgtcgtcgacgccgcggggttcgccgcctcctacgacgatcaccaccac
cacacctcgtccgcctacccgatgccatcccaggagaatcagcaggagggccccgccggc
gatgagacggggccgtgcgcaaagtgcggcggcctcgcctccaagaagtgttccggctgc
aagcgcgtgcggtactgttctcaagaatgccagacaaagcattggcaaactgatcacaaa
ttcaagtgcaagcaaataaaatttttggatcctgctgacaagttatcctgtggaggtgag
gccaacaataagaaatcatctggtttcggtcgcatctcattagtgtctgcccgtaaaaag
ttaaacaaggttctctttccttacgatgaatttttaaagctgtactactggaaggacttt
gattttgtaccttgtgggcttatgaattgtggcaacagctgctttgctaacgtggtttta
cagtgtctctcatgcacgagaccacttgtggcctatctgttaggaaaggaccatagcagg
gaatgttctatgagacatgaagaatggtgtttcttgtgcgagctgcaatgccatattcaa
agagctaatgaaagtttacacccatttgctcctatgaacattctttctcatctgccaaat
attggtggcaaccttggcttcggtagacaagaggatgctcatgaattcatgacgtttgcg
atagataagatgcaatcagcttgccttgatgaatatggaggcgagaaggctgtagatctt
agcattcaagagacaactgttgttcagcacatatttggtggacggttgcagtctcaggtt
caatgtactgcatgtggaatggtctcaaaccgctatgataatatgatggacttgacagtt
gaaattcaaggtgacgctgaatccttggagaaatgcttggatcagttcactgctgtagag
tggcttgatggggataataagtacaaatgtgatggatgcaatgactatgtcaaagcacgg
aagcatctttcagttcatcaagctccaaatatactcaccgtcactctcaaaagattccag
agtgggagatttgggaaactgaacaagagagttacatttccgatggagttagatcttacg
tcgtacatgagtagcactgatggaagtgacctgtacgatctctatgctgttgttgttcat
ctggatatgctgaatgcttcattttttggccattatatatgctatatcaaaggttatcga
ggaagttggtataaaattgatgaccacaaggttatgattgttgatgaggaggaagtgcat
gctcaaggtgcttatacgcttttatatagcaggagaatggcccgtcccaggccacttatt
gcagttgaagaactggtgaaacagcaacaacaatgcatggtgcttccttcaaatgggcaa
aactatccaataccagaggatacaacattaacctgtgaatcaccttcaaagtcttcagaa
gatctgttaaaacaggattctgaattcaacaatgaatctttgcataaaatggacatcaag
gacctagagtcagacttggatctacatataagcattgagggcgacaaatccaatggcaat
gagaatctacattcgccaggttcaccagtatcacatgttcttgaagatactggagctcca
ggttctcaattagaaggctctacttccatgagatctgttcaatttgaccctccattagaa
ggcggtcctactaccctgagctctgtgcaatttggcaattctacgagtgaagcatcttca
gttcattcctttgcagagcaatgcgagtagcctgtctcatgtattgattcagttgattac
atgcgcgttgatactgaagctggcgcagaagttgagagatggaatgagcgaccatcagtc
ttagatgattcaattggaaggacagacaatgaaacatcagccccaaccttggcgaatggg
atggcaggaaaaccaaaaccactattttctcgtggtttccttgataagccctcaagaaag
aggtcttcctttccagaagagggtcacattggtggcaatagcgctggttcctctcggaag
ttaaatggccattgcaaagaacatctcaacagctcagagaaaggagttcttgtcaactcc
tgtggtggcaacccttcctctggaagtgggaagtgcaacggagatatgattgcaacgtcc
agtaatggtaattactatgcagtgaatggtgataaacaatctagcaatgactccttgcat
gcaagcaagcgagatgtgccttttgtttctgatggttttaatccaagaccttacagggaa
ccatcagacatcaacacaaattgcagtaatacaagcagtggtaaaccattgaaagcttgc
caaggggacatgtcattcttgcatcggggcttccttgaaaggccttgttctagaggccaa
tcagtcaaagttgaggaaggcttggcatttagtaatggcacatcatcatcctttgtgaat
ggcaacattaagtcaagtaataactcatcttctcgaactggcttgtctcctggatttctt
acaaggcattgcagggagtctgcagtcctatgcacctctgcgagctgtatgcatggtctg
gaaacaagctctaacatttctatggagcacaaatctaaaggcactgcagtagcgctagac
catatagaagataggtggagttcagattgcagaacgaatggctctttgttgcaactgaga
gcttcaaatgataatgctattgaccaccttggtgaaaatggccatgcaattttgaccatc
gagaataccagttgtgagcaagtaaatggcagtaatggaactactgatgtgaatggtgta
ggtcaccaaagggatggcgctcctgccatgttggtctctgagaaaagcatggggtctgaa
catgatggtttgcggcgaagagtaacctcgaaatattttgagcagaatggtattgatgcc
aaataa
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