Phragmites australis (common reed): 133930201
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Entry
133930201 CDS
T10575
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03410
Base excision repair
paua03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133930201
03450 Non-homologous end-joining
133930201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133930201
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133930201
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
133930201
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
133930201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_8
BRCT_2
Motif
Other DBs
NCBI-GeneID:
133930201
NCBI-ProteinID:
XP_062232857
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All DBs
Position
10:27882311..27898085
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AA seq
318 aa
AA seq
DB search
MARKRKPARAAARDPDGMFRGVSAFVVSHAVQPRRLEVWKQRLVQMGARIVEKLAKGAPA
VNHVLAMDAKALLRELDAAWLHRFRGSVVSFEWLEECFKAGERLPEYKFAINYEEEFKPK
KAAITGDSCASQPAKNSKMSSKDPGDHKGTRTEEEQVTGGHPDARSNLTSAHVNEGSCIE
MRPNQYACRQSSSGDTKDCIAAEGTYGKKLGGGGMSIYYIANLNRNMTKIFGRLIDIYKT
LGDDRRSFIYYKAILVIEKLPFKIESADQVKGFPAMGKSLKDHGTDSGVDTYFGLCTYPG
RDLRHRIDLKGGQIGCDG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagcggaagcccgcccgggcggcggcgcgggatcctgacggcatgttccgc
ggcgtctccgccttcgtcgtctcccacgccgtgcagcctcgccgcctcgaggtgtggaag
cagaggctggtgcagatgggggcccgcatcgtggagaagctcgcgaaaggcgcgccggcg
gtcaaccacgtgctggccatggacgccaaggcgctgctccgggagctcgacgccgcctgg
ctccaccgcttccgcgggagtgtggtgtcctttgagtggctggaggagtgcttcaaggcc
ggagagaggctgcccgagtacaagtttgcgatcaactatgaagaggaatttaagccgaag
aaggcggctatcaccggagattcatgtgcgtcacagcctgcaaaaaacagcaagatgtct
tctaaggatcctggggatcacaagggaactagaacagaggaggagcaagttactggaggg
catccagatgcaagatcaaatctaacaagtgcacatgtgaatgaaggttcatgtattgaa
atgaggcctaaccaatatgcatgtagacaaagtagctccggagataccaaggattgcatc
gctgccgaaggtacctacggcaaaaagttgggggggggggggatgagtatatattacatt
gctaatttgaataggaacatgaccaagatcttcggaaggcttattgatatatataagacc
ctgggagatgacaggagatcatttatctattacaaggccatactggtgattgagaaattg
ccattcaaaatagaaagtgcagaccaagtcaaaggcttccctgctatgggaaaatctttg
aaagaccatggaactgatagtggggttgacacatattttggtctttgcacatatcctggg
cgtgacctgcggcaccgtattgacttaaaaggcgggcagatcggctgcgatggttaa
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integrated database retrieval system