Phragmites australis (common reed): 133930438
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Entry
133930438 CDS
T10575
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
paua01003
]
133930438
Enzymes [BR:
paua01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
133930438
Glycosyltransferases [BR:
paua01003
]
Polysaccharide
Structural polysaccharide
133930438
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
133930438
NCBI-ProteinID:
XP_062233071
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All DBs
Position
10:25004275..25008811
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AA seq
511 aa
AA seq
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MGWKVASGWKVASGGKAAAVGGEKFRFPPSSAAARSRMKLWVVRATTTLLLWTCVVQLTA
VGDTWGPRVLKGWPSCLTAPEEAADALAGATRPQPVVEKAALPPKRIYRNNGYLMVSCNG
GLNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFISSLRDEVRIL
RELPPRVKKRVELGMFHSMPPISWSDISYYHKQILPLFRKYKVLHLNRTDARIANNDLPI
EIQKLRCRVNYASLRFTSQIEELGGRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCSH
EEAEELTRMRYAYPWWKEKIIDSDLKRKDGLCPLTPEETALVLRALDIDRSMQIYIAAGE
IYGGKRRMAALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDG
NMAKVVEGHRRFMGFKKTILLDRKLIVELVDRYNNGSLRWDEFSKLLKAAHVKRMGSASK
RTVIPDRPKEEDYFYANPQECLQDRDPLQTS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaaggtggcgtcagggtggaaggtggcgtcagggggtaaggcggcggccgtc
ggcggcgagaagttcaggtttcctccgtcgtccgcagccgcgcggtcgcggatgaagctc
tgggtggtgcgcgccaccacgacgttgctgctctggacctgcgtcgtgcagctcaccgcc
gtcggcgacacctggggcccgcgggtgctcaagggctggccctcctgcctcacggcgccg
gaggaggcggccgacgcgctcgccggcgccacgcggccgcaacccgtcgtcgagaaggcc
gcgctgccgcccaaaagaatatataggaacaacggttatttgatggtttcgtgcaatggt
gggcttaaccaaatgcgagctgcaatatgtgacatggttgtaattgcaagatatttgaat
gtcactttagttgtaccagagttggataagacttcattttggaatgatccaagcgagttc
caagatatatttgatgttgaacacttcatatcctcattacgagacgaagttcgcattctg
agagaactacccccaagggtaaagaaaagagttgaacttgggatgtttcactcaatgcca
ccgattagttggtcggatatctcctattaccataagcagattcttcctttgtttcggaag
tacaaggttctccatttgaatagaactgatgccaggatagcaaacaatgatttgccaata
gagattcagaaactgcgatgccgagtaaattatgcctctctcagatttacctcacaaatt
gaagagttgggcggtagagtaattagaatacttcgccaaaatggcccttttttagtcctt
catttacgttatgaaatggatatgctggctttctctggctgtacacaaggttgcagtcat
gaagaggcagaagagctcacaagaatgaggtatgcttatccatggtggaaagagaaaatc
attgactcagacttgaaaagaaaagatggcctttgcccattgacgccggaggagactgct
cttgtcctcagagcattggacattgatagaagtatgcaaatatacattgctgctggagaa
atttatggtggaaagcgcaggatggctgctctaacttcagcatatccgaatgtggtaagg
aaggaaacacttctggaaccttctgatctgatgttcttccagaaccattcatcacaaatg
gcagcactggattacttggtatctttagaaagtgatatatttgttccaacatacgatggc
aatatggctaaagtagttgagggtcatcggagattcatgggtttcaagaagacaatcttg
ttagatcgaaaacttattgttgagctagtagatcggtataacaatggttctctccgctgg
gatgagttctctaaattgctcaaggctgcccatgtgaagcggatgggatcagcttcgaag
aggacagtgattcccgacagacccaaggaagaggactacttctatgccaatccccaagaa
tgcctccaagatcgtgatcctttacagacatcatga
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