Phragmites australis (common reed): 133930785
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Entry
133930785 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133930785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133930785
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133930785
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133930785
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
133930785
NCBI-ProteinID:
XP_062233505
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Position
1:7928810..7930256
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AA seq
291 aa
AA seq
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MAGGKRVSSDPIKTGIGRGLCATKKVRPCVRGEAAAATNQREEEKIKITVAIDPELLECG
VCFGPLTPPLFQCAKGHISCSECCTGQAVDYECLMCREPETATRCRAMERVLDGLSVPCA
FRQHGCAKMIPYAEKPAHDASCDYAPCYCPIAGCAGGYAGATLRDHVELDHPAVHRTRVR
PGCLTALRMRAGEVARMVCLGPGTAEFLLVVARDVPSGRALSVVRLMDEPFEEEFRYRIE
VVGKAGVLSLSGQADGIDRLPRPYQARAFLFVPDAIWDSSPEDIPVFIELK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgggaagagggtttcgagtgatcccataaaaacgggcataggaaggggcttg
tgtgctacaaagaaggtcaggccatgcgtgcgaggtgaggccgcggctgcgacgaaccag
cgtgaggaagagaagatcaagatcaccgtcgccatcgaccccgagctgctggaatgcggt
gtttgcttcggcccactgactccacctcttttccagtgcgccaaaggccacatctcatgt
tcagagtgctgcaccggtcaggctgtggactacgagtgcctgatgtgccgtgagccggag
accgccacccgctgccgcgccatggagcgcgtcctcgacggcctgtcggtgccgtgcgcg
ttcaggcagcacggctgcgccaagatgatcccgtacgcggagaagcccgcccacgacgcg
tcgtgcgactacgcgccgtgctactgccccatcgccggctgtgccggcggctacgccggc
gcgaccctgcgcgaccacgtcgagctggaccacccggcggtgcaccgcacccgcgtcagg
cccggctgcctcaccgcgctgaggatgcgcgcgggcgaggtggcccgcatggtatgcctc
ggccctggcacggcggagttcctgctcgtcgtcgcgcgagacgtgccgtcagggcgcgcg
ctgtcggtggttcggctcatggacgagccgttcgaggaggagttcaggtacaggatcgag
gtggtcggcaaggcgggcgtgctctcgctgtccgggcaggccgacggcatcgatcggcta
ccaaggccgtaccaagcgagagcgttcctcttcgtcccggacgccatatgggactcttct
cctgaggacatcccggtgttcatcgagctgaaatga
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