Phragmites australis (common reed): 133930878
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Entry
133930878 CDS
T10575
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
KO
K17302
coatomer subunit beta'
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133930878
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133930878
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133930878
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133930878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WD40_RFWD3
Clathrin
Beta-prop_DCAF12
TPR_GEMI5
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
133930878
NCBI-ProteinID:
XP_062233631
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Position
10:complement(33352020..33362894)
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AA seq
911 aa
AA seq
DB search
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQAMVKSFEVSELPV
RSAKFVSRKQWVVAGADDMLIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTTKIWSLGSPDPNFT
LDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLDGHTHNISAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG
REVPVASMDTSGKIIWAKHNEIQTVNIKTVSAGFEVTDGERLPLAVKELGCCDLYPQNLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSEGEYAIRESTSRIKFFNKSFQ
EKKTVRPTFSAERIFGGVLLAMCSNDFICFYDWADCRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVASYIEGGKPVDEEGVEDAFELLHEVNERVRTGIWVGDCFIYNNS
SSRLNYCVGGEITTMYHLDRPMYLLGYLANQSRVYLIDKEFNVVGYTLLLSLIEYKTLVM
RGDLERANEVLPSIPKAQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGKLEIAKA
IAIEAQSESKWKQLGELAMSTGKLEMVEECLLQAKDLSGLLLLYSSLGDAEGVEKLASLA
KGHGKNNVAFLCLFMLGKLEDCIQLLVDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSK
VNPKAAESLADPSEYPNLFEDWQVALTVEKSVASQRGHYPPADEYLNHAEKSDMTLVEAF
KRMQVTEDEEPVDAADENGEPDQEALEEIKVEENTDEAVPDDADEPEETILVNGNDGEEQ
WGTNSEGTLSA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcaggttggagatcaagaggaagttcgcgcaacggtcggagagggtcaagtcg
gtggacttgcatccaacggagccatggatcctttcgagcctctactcagggagtgtctgc
atctgggattatcagtcacaggctatggtgaaatcatttgaagtctcggaactaccagtg
cggtctgcaaaatttgtttcgaggaaacaatgggttgtcgctggtgcagacgatatgctc
attcgcgtctacaactacaataccatggacaaagttaaagtttttgaggctcatactgat
tacatcagatgtgttgcagtccatccaactcttccatatgtactgtcatcatctgatgac
atgttgataaaactgtgggattgggataaagggtggatgtgcactcaaatctttgagggg
cattcgcactatgtgatgcaggttactttcaatccaaaggatactaacacctttgcaagt
gcatctcttgaccgcactacgaagatatggagtttgggttctccagatccaaattttaca
cttgatggacatcagaaaggtgttaactgtgttgactacttcactggtggtgatagaccc
tatttgattaccggttctgatgattccactgcaaaggtctgggattaccaaacaaaaagc
tgcgttcagacacttgacggccatacacataacatttctgctgtttgtttccatcctgag
cttcctataatcattactggatcagaagatggcacagttcgtatatggcattcgacaact
tacagacttgagaacacactgaactatggccttgaaagagtttgggccgttggatacatg
aagggatcaagaaggatggttattggttatgatgagggaactattatgataaaaatgggt
cgtgaagtaccggtagcaagtatggatactagtggaaaaatcatttgggcgaaacataac
gagatacaaactgtgaatatcaagactgtcagtgcaggctttgaggtcactgatggtgaa
agattgcccctggctgtaaaggagttaggatgttgtgatctatacccgcagaacttgaag
cataatcctaatggccggtttgttgttgtatgcggagacggcgaatatataatttatact
gctctggcctggaggaacagatcatttggatctgcattggagtttgtttggtcatcagaa
ggtgaatatgcaatcagggaaagcacatcaagaataaaatttttcaataaatcatttcag
gagaagaaaaccgtccgtcctacattttcagcggagcgtatttttggtggggtattgttg
gcaatgtgttccaatgacttcatttgcttttatgactgggctgattgcagactaatacgc
cgcattgatgtgaatgtcaagaacctctattgggctgatagcggtgacctagttgcgata
gcaagtgatacatcattctacatcctcaagtacaatagggatgttgttgcttcttatata
gaaggtggaaagcctgtggacgaggaaggtgttgaagatgcttttgagctgcttcatgaa
gtcaatgagcgagtgcggacagggatttgggttggagactgtttcatttataacaactca
tcttcacgactaaattattgtgttggtggtgagatcaccacgatgtatcatttggatcgc
cctatgtacttgttgggatatcttgcgaatcaaagtcgagtttatctcattgacaaggag
tttaatgttgtggggtacacattacttctcagtttgattgagtataagacccttgtgatg
cgtggggatttggaacgtgcaaatgaagttttaccatccataccaaaggcacaatataat
agtgtcgctcatttcttggaatctagaggtatgttggaggaggctcttgagatagccact
gatgctgattacaagtttgacctagctgtgcagcttggaaaattagaaattgcaaaggct
atcgccatagaagcacaaagtgaatccaaatggaagcagctgggcgaacttgccatgtcc
acaggcaagctagagatggtggaagaatgccttcttcaagcgaaggatttaagtggcctg
ttgctactatactcatctcttggtgatgctgaaggagtcgaaaagcttgcttctctagca
aaagggcatgggaaaaataatgttgctttcctctgcctttttatgctcggtaaattggaa
gattgcatacagttgctcgtagacagcaatcgtatacctgaagctgcattaatggcacgt
tcttatctacccagcaaagtctcggagatagtagcaatttggagaaatgacctcagtaaa
gttaatccaaaagctgcagagtctctggcagatccttctgagtatccaaatttatttgaa
gattggcaggttgcacttactgtagaaaagagtgttgcttctcaaaggggccattatcct
ccagctgacgagtacttgaaccatgctgagaagtcagacatgactcttgtggaagctttc
aaaaggatgcaggtcactgaagatgaggaaccagtagatgcagcggatgaaaatggagag
cctgatcaagaggcattggaagagattaaagtggaggagaacacggatgaagctgtccca
gatgatgctgatgaacctgaagagactattcttgtaaatgggaatgatggtgaggaacaa
tggggtacgaacagtgaaggaactttgtcagcctaa
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