Phragmites australis (common reed): 133930906
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Entry
133930906 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133930906
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133930906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133930906
Spliceosome [BR:
paua03041
]
Complex B
Other components
RES complex
133930906
Complex C
133930906
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
133930906
NCBI-ProteinID:
XP_062233665
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Position
10:33698733..33703494
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AA seq
599 aa
AA seq
DB search
MAANQPPPSSASAPAAGLSLKEYLKRYQSGPAADGDQKKAKKKTKKKPKPSAGGGGVLIV
DEDPVWQKPVQVEDDEPASSGDDRPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVT
VAAPEEQSGGSTRQRRNDTPSPERGAGRKDLSPPRRRQRRDMPSPDRGDDDGEDLSPPRQ
RQKRRDTPSPKGNDIAEQDDLSPPRKSRRQEDPSPPRRRARHDSEKLQNLLPRPRRMRHD
SEEPQDLSPLRRRARHDSEEPKDLSPPRRRARHDSEEPKDLSPPRRRARHDSEEPKDLSP
PRRRARHDSEEPKDLSSPRRRKHQNSSELDDLSPPRRQNFGRSLEDGDMSPPRKGRKFAS
DDLSPPRKERDLSPPRKGRKEGAPNEVRRAGLMTAEEVKEDIRKIKEDEKLKFAAQDPSL
VGKGAKAVFRDKEGRRISEEEMRKAKEPKKPKEIHIEWGKGLVQKREAEARLQELEAEKS
KPFARTRDDPELDTMLKNTIRWGDPMAHLVKRKDPEFLLEDLGDDEKMKESGFIVPQNIP
SHSWMKRGVDPPPNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQATEQEAYLWSVSDM
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatcagccgccgccgtcgtccgcctccgcgcccgcggcgggactctccctg
aaggagtacctcaagcggtaccagtccggacccgccgcggacggcgaccagaagaaggcc
aagaagaagacgaagaaaaagcccaagccctccgccgggggaggcggggtgctcatcgtc
gacgaggaccctgtgtggcagaagcccgtgcaggtcgaggacgacgagcccgcgtcgtcc
ggtgacgataggcctctcgtggacgaggacattgaggtcaagcggatgcgtcgcctggaa
gcgatacgcgcggcgcggccgtacaatgccatcgcggaggacggcagtgggtgggtcacc
gtggccgcccctgaggagcagagtggcgggtccacccgtcagcgcaggaacgacacgcca
tcaccggagcggggcgccgggaggaaggacctttctcctccgcggcgtagacagcggcgc
gacatgccctcaccggaccggggagatgatgatggcgaggatctttcgccaccgaggcag
aggcaaaagcgccgagacacaccatcgccaaagggcaatgatatagcagagcaggatgat
ttgtcaccaccacggaagtctaggcggcaagaagatccctcacctccaaggaggcgtgct
cgtcatgactctgagaagctccaaaacctcttgccacgcccaaggcgcatgaggcatgac
tcagaggagcctcaagacctctctccactacgtcgaagagcacggcatgactccgaggag
cccaaagatctctctccaccacgtcgaagagctcggcatgactctgaggagcccaaagac
ctctctccaccacgtcgaagagcacggcatgactccgaggagcccaaagacctctctcca
ccacgtcgaagagcacggcatgattcggaggagcccaaagacctctcatcaccacggagg
aggaagcaccaaaactcttccgagctggatgatctgtcacctccaagaaggcaaaatttt
ggacggagtctggaggatggggacatgtcaccaccaaggaagggtcgaaaatttgcatct
gatgatttatctcctccgcgtaaggagagggacctttccccccctaggaaaggtagaaag
gaaggagctccaaatgaggtgaggagagctggattgatgacagcagaggaagttaaagag
gacatcagaaagattaaggaggatgagaaactcaagtttgcagcacaggatccctcgttg
gttgggaaaggggcaaaggcagtattccgagacaaggaaggaagaaggataagtgaagaa
gagatgcgcaaggcaaaagaacctaagaagccgaaggaaatacatatagaatggggtaaa
gggttggtgcagaagcgagaagctgaagctagattacaagagcttgaagctgagaagagt
aagccatttgcaagaacaagggatgaccctgagcttgataccatgctaaagaacacaatc
cgatggggtgatcctatggctcatcttgtcaagcggaaagatccagaatttcttctggaa
gacttgggagacgatgaaaagatgaaagaatctgggttcatagttccccaaaatatacct
agtcacagctggatgaaacgtggagtggatcctcctccaaaccgttatggcataaaacct
ggtcgtcattgggacggagtggatcgcagcaatggattcgagaaggacatgtttaagcta
aagaacgagaagcaagcaacggagcaagaagcctatctttggtctgtctcagatatgtga
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