KEGG   Phragmites australis (common reed): 133930936
Entry
133930936         CDS       T10575                                 
Name
(RefSeq) uncharacterized protein LOC133930936 isoform X1
  KO
K13254  spastin [EC:5.6.1.1]
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133930936
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:paua04812]
    133930936
Enzymes [BR:paua01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     133930936
Membrane trafficking [BR:paua04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    133930936
Cytoskeleton proteins [BR:paua04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     133930936
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 Vps4_C NPHP3_N AAA_22 AAA_16 AAA_14 TIP49 Mg_chelatase AAA_2 DUF815 RNA_helicase IstB_IS21 AAA_25 nSTAND3 DUF4368 AAA_33 Guanylate_kin AAA_24
Other DBs
NCBI-GeneID: 133930936
NCBI-ProteinID: XP_062233702
LinkDB
Position
10:complement(34000796..34006747)
AA seq 489 aa
MSFLRGLADTFSSLLSSSGGGAGAPMDAPSPSPAAVVGERVAVKLRGYFELAKEEIDKAV
RAEEWGLPDEAAAHYRNAQRVMLEAKAARVPDAVPSSERGQVRVYQEKIAKWQAQVEERL
RVLGQRSGEGAAAAVEPKKAVTSNPVIRTAKPAPTSIQKSTLRNSPTFNRGGQASAPQKN
ISGGSKPVQRAAGSYDDKLVDMINTTIVDRSPAVKWDDVAGLDKAKQALMEMVILPTKRR
DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRT
LFMVAIDRQPSVIFMDEIDSVMSTRLANENDASRRLKSEFLIQFDGVSSNPDDLIIVIGA
TNKPQELDDAVLRRLVKRIYVPLPDYNVRRLLLKNQLKGQAFKLSSHDFERLAVETEGYS
GSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLKYDDFKNAMTVIRPSLQKSKWDELE
KWNQQFGSS
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgagcttcctgcgcggcctcgcggacacgttctcctcgctgctctcctcgtcgggaggc
ggggcgggggcgcccatggacgcgccgtcgccgtcgccggcggcggttgtgggggagcgc
gtggcggtgaagctcaggggctacttcgagctcgccaaggaggagatcgacaaggccgtg
cgtgccgaggagtgggggctccccgatgaagccgccgcgcactaccgcaacgcgcagcgc
gtcatgctcgaggccaaggccgcgcgcgtccccgacgccgtcccgtccagcgagaggggg
caggtcagggtgtatcaggagaagatcgccaagtggcaggcacaggtcgaagagcggctc
agagtgctcggccagaggagcggtgaaggagctgctgctgcagtggagccgaagaaggct
gttacaagcaatcctgtaattaggactgcaaaaccagcacccactagcatccaaaagtct
actttgcggaatagcccgacctttaacagaggtggccaagcatctgcacctcagaagaat
atcagtggaggttccaaacctgttcaaagagctgctggaagctatgatgacaagcttgtc
gacatgataaatacaaccattgtggatagaagtcctgctgtaaaatgggatgatgttgct
ggtcttgacaaggcaaagcaagcacttatggaaatggttattttgcctactaaacgaagg
gatttgttcactggccttcggagacctgctagggggttgcttctctttggcccacctggg
aatggaaaaacaatgctcgccaaagctgttgcatcagaatcagaagcaacattttttaat
gtttcggcttcttcattgacatcgaagtgggtaggcgaggctgaaaagcttgtccggaca
ctttttatggttgctattgatcggcaaccatctgttatttttatggatgagattgatagc
gtcatgtcaacaaggttagctaacgagaacgacgctagcaggcgattgaaatcagaattc
cttatccagtttgatggggtgtcttcgaacccagatgatttaataattgttataggggct
acaaataaaccacaagagttggatgatgctgttcttcgaagacttgtaaaaagaatatat
gtcccactacccgattacaatgtacggaggttacttctgaaaaatcagctcaaaggacaa
gcattcaaattatccagtcatgattttgaaaggcttgctgtagagactgaaggatactct
ggaagtgacctgagagcactgtgcgaagaagctgcaatgatgccaataagagagcttggt
ccacagaatattcttacaataaaagcaaatcagttgcgacctttgaaatacgacgatttc
aagaacgcaatgactgtgattaggccaagcttgcagaagagcaaatgggacgagctggag
aaatggaaccagcaattcggttcgagttga

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