Phragmites australis (common reed): 133930936
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Entry
133930936 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133930936 isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133930936
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
paua04812
]
133930936
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
133930936
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133930936
Cytoskeleton proteins [BR:
paua04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133930936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
Vps4_C
NPHP3_N
AAA_22
AAA_16
AAA_14
TIP49
Mg_chelatase
AAA_2
DUF815
RNA_helicase
IstB_IS21
AAA_25
nSTAND3
DUF4368
AAA_33
Guanylate_kin
AAA_24
Motif
Other DBs
NCBI-GeneID:
133930936
NCBI-ProteinID:
XP_062233702
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Position
10:complement(34000796..34006747)
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AA seq
489 aa
AA seq
DB search
MSFLRGLADTFSSLLSSSGGGAGAPMDAPSPSPAAVVGERVAVKLRGYFELAKEEIDKAV
RAEEWGLPDEAAAHYRNAQRVMLEAKAARVPDAVPSSERGQVRVYQEKIAKWQAQVEERL
RVLGQRSGEGAAAAVEPKKAVTSNPVIRTAKPAPTSIQKSTLRNSPTFNRGGQASAPQKN
ISGGSKPVQRAAGSYDDKLVDMINTTIVDRSPAVKWDDVAGLDKAKQALMEMVILPTKRR
DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRT
LFMVAIDRQPSVIFMDEIDSVMSTRLANENDASRRLKSEFLIQFDGVSSNPDDLIIVIGA
TNKPQELDDAVLRRLVKRIYVPLPDYNVRRLLLKNQLKGQAFKLSSHDFERLAVETEGYS
GSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLKYDDFKNAMTVIRPSLQKSKWDELE
KWNQQFGSS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctgcgcggcctcgcggacacgttctcctcgctgctctcctcgtcgggaggc
ggggcgggggcgcccatggacgcgccgtcgccgtcgccggcggcggttgtgggggagcgc
gtggcggtgaagctcaggggctacttcgagctcgccaaggaggagatcgacaaggccgtg
cgtgccgaggagtgggggctccccgatgaagccgccgcgcactaccgcaacgcgcagcgc
gtcatgctcgaggccaaggccgcgcgcgtccccgacgccgtcccgtccagcgagaggggg
caggtcagggtgtatcaggagaagatcgccaagtggcaggcacaggtcgaagagcggctc
agagtgctcggccagaggagcggtgaaggagctgctgctgcagtggagccgaagaaggct
gttacaagcaatcctgtaattaggactgcaaaaccagcacccactagcatccaaaagtct
actttgcggaatagcccgacctttaacagaggtggccaagcatctgcacctcagaagaat
atcagtggaggttccaaacctgttcaaagagctgctggaagctatgatgacaagcttgtc
gacatgataaatacaaccattgtggatagaagtcctgctgtaaaatgggatgatgttgct
ggtcttgacaaggcaaagcaagcacttatggaaatggttattttgcctactaaacgaagg
gatttgttcactggccttcggagacctgctagggggttgcttctctttggcccacctggg
aatggaaaaacaatgctcgccaaagctgttgcatcagaatcagaagcaacattttttaat
gtttcggcttcttcattgacatcgaagtgggtaggcgaggctgaaaagcttgtccggaca
ctttttatggttgctattgatcggcaaccatctgttatttttatggatgagattgatagc
gtcatgtcaacaaggttagctaacgagaacgacgctagcaggcgattgaaatcagaattc
cttatccagtttgatggggtgtcttcgaacccagatgatttaataattgttataggggct
acaaataaaccacaagagttggatgatgctgttcttcgaagacttgtaaaaagaatatat
gtcccactacccgattacaatgtacggaggttacttctgaaaaatcagctcaaaggacaa
gcattcaaattatccagtcatgattttgaaaggcttgctgtagagactgaaggatactct
ggaagtgacctgagagcactgtgcgaagaagctgcaatgatgccaataagagagcttggt
ccacagaatattcttacaataaaagcaaatcagttgcgacctttgaaatacgacgatttc
aagaacgcaatgactgtgattaggccaagcttgcagaagagcaaatgggacgagctggag
aaatggaaccagcaattcggttcgagttga
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