Phragmites australis (common reed): 133931028
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Entry
133931028 CDS
T10575
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133931028
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133931028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
133931028
NCBI-ProteinID:
XP_062233836
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All DBs
Position
10:34788727..34796933
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AA seq
1472 aa
AA seq
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MASDSDDTTDADFFDKLVQDDDDQDLPLDDASAADLADAAPPPEPQRKPAAPPLPFQSEP
AAAHPEAEADRHHVAPPPQAHPDTAPAPALPEAEAPEPRPDAEGGSPRSDKGVRTAVKQV
QWNDFGGSSGADPFGDLLADGAEDAIFEGAVAGDQGGQTSVTGSISAGAAHHSLSGGVDY
NAQLDSSASAAAYGDRSNNAQLDSTDPNYLLSESLYPGWKYNEATQQWYQVDTLSAQQAV
ADNTGAMTVLGSQNVQQQQQQFGASYLHNSSHAALETIAEESNTNATSWGHDGSNAAPVE
YPSNMLFYAEYPGWYFDTNTQQWQTLESYQQTVAQTAATSDGFAGTHHSVAHTLDSYKNS
CSQQSQWQPGSFRNSMQPDGLGGNNLSGSSYGSSEQAKNQIKQQVNAETLQSSTNYQTNI
NTFVPSTGQYAGSEGNQAKYEGFEPSASHHSAYEGLEPSASDLGTTMSDQSGYMGSAPYT
DHQGFKPLTSDQGWYRGFEHSTAQEVGYKGHEPSTGYQTGHKGFDHQASHMAYEPLTSHG
YDSLNGVTNPQEFIPKENMYKIETPADSAAHMHLPNNYWDRNTSMDFAQQQLVGPNGPSQ
HVFSPHEQRSSAGRPPHALVTFGFGGKVLVLKETSSMTANFGSGNQGNSGRTVSILNMPE
IFADKIYHSSVPSSALSFFHALYRHPIPGPLVGGSAAAKDVNKWLDDTIGGYESSVREFQ
GGDVQKLLISLLKILCQHYGKLRSPFGSDPSEGIDGPEMAVTKLLSSCKSSANMKGYGAV
VHCMKNLPLESQIQATAQEVQNLLVSGRRIEALQYAQEGQLWGPALILALQLGDKFYADT
VKKMAHCHFVSGSPLRTLCLLIAGQPADVFNFENPVDSGSLHTPHQPVEAAPKGMLDDWQ
ENLAIITANRTKGDDLVITHLGDCLWKEKNEVASAHACYLVAELNIDSYSESARMCLIGA
DHLRCPRTFTSPEAIQRTEVYEYAKVLGNSQYILLPFQPYKLIYAYMLAEVGKVSDSLRY
CQASLKLLKASGRTPELEAWKQLFSSLEERIRTHQQGGYATNLVPGKIVGKIFTSLDKSI
SRMMGTQSAPLPQLPQGTANEREIYSIPGTKVVNSQSVMSMSPLMSSASEQSMSEMAGNS
GPGREVAHNRSISEPDFGRTPQQQGAGSSKAQSTSGSGSSRFGWLMQKTMGLVSKSHRQA
KLGEQNKFYYDEKLKRWVEEGAEVPAEEPPLPPPPTKASLQNSIPDYNMNGPVGGGYTAN
GFVEAKTLNPSELSSGMPPIPPTQNQFSARGRMGVRSRYVDTFNKGGGANPSGAATLYSK
PAAPSMNPLSGAKFFVPTPAVVASEETADFKVDAHSETSQQGEPSSSPALEAAFGSPPPP
VPKLSTIQRYPSMDNIMTPSDSVSSSLSRSRASSWSGTYPDQFSSSAVSRSPDRQTMQSS
LMPGKRPPHSRSSSNSSVQYNGLGEDLHEVEL
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgactccgatgacaccaccgacgctgacttcttcgacaagctagtccaggac
gacgacgaccaagatctcccccttgacgacgcatctgcggcggacctcgccgacgcggcg
ccgcctcctgagcctcagcgtaagcctgctgcgccgccgcttccttttcagtctgagccc
gcggcggcgcatcccgaggctgaagctgaccgtcaccatgtggcgccgcctccccaggct
cacccagatactgcgcccgcacccgcgcttcctgaggccgaggccccggagccgcgcccc
gacgcggagggcggatccccgcggtccgacaagggcgtccgcaccgccgtcaagcaggtg
cagtggaacgactttgggggcagcagcggagcagatccgtttggggacctcctggcggat
ggagcggaggacgccatcttcgagggtgctgtggccggggaccagggcgggcagacttcc
gttactggtagcattagtgctggagcggctcatcacagcctttccggtggagtggattac
aacgcacaattggattcgagcgcaagtgctgcagcgtatggggatcggagcaacaatgca
caattggactccactgatcccaactacttgctctcggagagcctctaccctgggtggaag
tacaatgaggcgacacaacagtggtatcaggtagatactctcagtgcacagcaggctgtt
gctgataatactggtgccatgacagtccttgggagccagaatgttcagcagcagcagcag
cagtttggtgcttcgtacctgcacaactcttcacacgcagcgctcgagacaattgcagag
gaaagcaacaccaatgccacaagctggggccatgatgggagcaatgcggcgcccgtagaa
tacccgtcaaacatgctcttctatgcagaatacccagggtggtacttcgacaccaacact
cagcagtggcaaacgctcgagtcataccaacaaactgttgcgcagactgcagcaacctct
gatgggtttgcagggacacatcatagtgtagcccacacattggattcttataaaaatagc
tgtagccagcagagccagtggcaaccgggttcattccgtaacagcatgcagcctgatggt
ttgggaggtaataacttgtcaggtagttcctatggttccagtgaacaggccaagaatcag
attaagcagcaggtcaatgctgagacattgcaatcgtctacaaattatcagactaatatc
aacacatttgtgccttctactggtcaatacgcaggtagtgagggcaaccaggctaagtat
gaggggttcgagccttcggctagtcatcacagtgcttatgaaggtttggaaccgtctgca
agtgatctaggtactactatgagcgatcagagtgggtacatgggctccgcaccttataca
gatcaccagggattcaagcctttaacaagtgaccagggttggtacagggggtttgagcat
tctacagctcaggaggtagggtacaaagggcatgaaccttcaacaggttaccagactggt
cacaagggttttgatcaccaggctagccacatggcatatgaacctttgacaagccatggc
tatgacagtttgaatggcgtcaccaatccacaagaattcattccaaaagagaacatgtac
aagatagaaacacctgctgactcagctgcacatatgcatttgccaaacaactattgggac
agaaacacctcaatggattttgctcagcagcaattggttggtccaaatggtccgtcccaa
cacgttttttcaccacatgagcagaggtcatcagctggacgcccaccacatgctctggtc
acctttggatttggggggaaggtcttagttctgaaagaaacgagctcaatgactgcaaac
tttggcagcggaaatcagggcaattctggtcgcacggtgtcaattcttaatatgccagag
atttttgctgataaaatctaccattcaagcgtccctagcagtgcacttagcttcttccat
gctttgtatcgtcatcctattcctggccctcttgttggtggaagtgctgcagcaaaggat
gtgaataaatggcttgatgacacgattggaggatatgaatcttctgtgagggagttccag
ggaggggatgttcagaagttgctcatttcgttgctgaaaatattgtgtcaacactatgga
aaacttcgctcaccctttgggtctgacccatcagagggtatagatggcccagagatggca
gtgacaaagcttttatcatcttgtaagagcagtgctaatatgaaagggtatggagccgtt
gtccattgcatgaaaaatctccccttggaaagccagattcaggctactgctcaggaggtt
cagaatctcctagtttctggtagaaggatagaggcccttcagtatgcacaggaaggccag
ctttggggacctgcattgatccttgctttacaacttggtgataagttttatgcggatact
gtgaagaaaatggctcactgccattttgtgtccggatcacctttgaggacgttgtgcctt
cttatcgctggacaacctgcagatgtttttaattttgagaaccctgtcgatagtggttct
ttgcatacaccccaccagcctgtagaggctgctcctaagggtatgctggatgattggcaa
gagaatttggctattataactgcaaataggacaaaaggcgatgaccttgtaattacccac
cttggggattgcctttggaaagagaaaaatgaggttgcatctgcccatgcatgctattta
gttgccgaactaaatattgattcatactctgaaagtgcaaggatgtgtctcattggtgca
gaccacttgagatgcccacgcacatttaccagccccgaagctatccagagaacagaggtg
tatgagtatgcaaaggttcttggtaattctcagtatatcctcttgccatttcaaccatat
aagctgatatatgcatacatgcttgcggaggttgggaaggtttctgattcactaaggtat
tgtcaagcatctctgaagctgctgaaggcctctggccgcacgcctgaactagaagcatgg
aagcaattgttttcctccctagaggagcggatacgtacccatcagcagggtggatatgca
acaaatcttgtccctggaaagattgttgggaagattttcacatcacttgataaatctata
tcccgcatgatgggtacacaatccgcaccattgccgcaattaccacagggcactgcaaat
gagagagagatctattctattcctggtacaaaagttgtaaatagtcagtcagtgatgtcc
atgtcacctttaatgtcttctgcttcagagcagtctatgagtgaaatggcaggaaatagc
ggccctggcagggaagttgcacataacagaagtatttctgagccagactttggcagaacc
ccacaacagcagggtgctggttcaagtaaggcacaaagtacatcaggctctggcagttca
cgctttggatggttgatgcagaagacaatggggcttgtttcaaaatctcatcgccaggcc
aaattaggggaacagaacaagttctactacgatgagaagctgaagcggtgggtggaagaa
ggtgctgaggtccctgccgaggagcctccacttcccccacctccgacaaaagcttcactc
cagaacagtattccagattacaatatgaatggccctgttggcggaggttataccgctaat
ggatttgtagaagctaaaaccttgaatccttctgagcttagttctgggatgccaccaata
ccacccacccagaaccaattctcagcgcgtggacggatgggtgttagatcaagatacgtt
gacacttttaacaagggtggtggtgcaaatccctctggagcagcaacattgtatagcaaa
ccagccgctccatctatgaatccgctttctggtgcaaagttctttgtgccaactccagct
gttgttgcttcagaagagacggctgacttcaaagtggatgcacacagcgaaacctcccaa
cagggtgaaccatcgtcctcaccagcgttggaggcagcgttcggttcaccaccaccaccg
gtaccaaagctgtcaaccatccaacggtacccaagtatggacaacatcatgaccccttca
gacagcgttagcagctcattgtcaaggtcaagagcatcttcatggagtggaacgtaccca
gaccagttcagcagcagtgctgtttctagatcacctgatcgacagaccatgcaatcatca
ctgatgcctggaaaaagaccaccacacagccgttccagcagcaactcatccgttcaatac
aatggtttgggtgaggatcttcacgaggtagagctctga
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integrated database retrieval system
