Phragmites australis (common reed): 133931043
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Entry
133931043 CDS
T10575
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133931043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133931043
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
133931043
Transfer RNA biogenesis [BR:
paua03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133931043
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
133931043
NCBI-ProteinID:
XP_062233859
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All DBs
Position
10:complement(34954502..34967134)
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AA seq
1070 aa
AA seq
DB search
MAPPPSLLRPAHQTLLPPCALPPPPLPSLFSPRHRRRPRLLSAAAADGDASAAISAGKGR
GSSPSSSVLTFQQAIQRLQEYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWNVAY
VEPSIRPDDSRYGDNPNRLQRHTQFQVILKPDPGNSQDLFLHSLSALGINVREHDIRFVE
DNWESPVLGAWGLGWEVWMDGMEITQFTYFQQSGSLPLLPVSVEITYGLERILMSLQGVD
HFKNIQYTEGITYGELFLENEKEMSAYYLEHADVDHIQKHFDDFEEEARSLLSLGLPIPA
YDQVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVETREELGHPLGTYEEA
NLIYPHVSKKPSREEGQGQPRAFVLEIGTEELPPHDVVEATEQLEKSLVTILEKRRLSHG
KVCSYGTPRRLAIVVENLSVKQMEVEVELRGPPVAKAFDQEGKPTKAAEGFCRKNNVPID
CLYRRTDGKTEYIYARVKESARFADEVLTEDLPSIISGISFPKSMRWNSNIVFSRPIRWI
LALHGDFVVPFSFASISSGNRSCGLRNSSLANFKVETAESYLHNVEKAGILIDTKKRKEK
ILHGSSILAIGVGGDFIAPGSLLKEVINLVEAPVPILGRYDDSFLELPKDVLITVMQKHQ
KYFPVICKTTGNLLPYFITVANGAVKEEVVCKGNEAVLRARYEDAKFFYKMDTQKKFSEF
RGQLSSILFHEKLGTMLDKMTRVENTVAELTLVLGINESVVPIIKEAAALAMSDLATSIV
TEFTSLAGIMARHYALRDGLPEQIAEALFEITLPRFSGDVFPKTDAGIVLAVADRLDSLV
GLFGAGCQPSSTNDPFGLRRVSYGLVQILVENKKNFDLRKALILMAEVQPIKIESNVIDE
AVQFVTRRLEQLLVDRGINCEIVRSVLMERANCPYLASQTAIEMEAFSRTEIFSKIVEAY
SRPTRIIRGKEIESALEVDPNVFDKDEEKVLWSAYLEAADKIHPGTHHVGVDIKTFANVS
LLLIQPLEDFFNNVFVMAEDEKIRNNRLALLRKIESLPKGIADLSVLPGF
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccgccttccctcctccgcccagcgcaccaaacgctactacccccctgcgcc
cttcctcctcctcccctgcccagcctcttctctcctcgccaccgccgacgcccgcgcctc
ttatctgctgccgcagccgatggtgacgcctccgccgccatctccgccgggaagggacgg
ggctcttccccatcctcctccgtcctcaccttccagcaggccattcagcgcctacaggag
tactgggcctccgtaggatgcgccgtcatgcagtgcagcaacactgaggttggagcaggg
acaatgaatcctttgacatttcttagagttttaggccctgagccatggaacgtcgcttat
gtggagccaagtataagaccagatgatagtcgctatggggacaatcctaataggcttcaa
cgtcatactcagtttcaggttattttgaagccggatcctggaaattcacaagatctcttt
ctgcacagcctttcagcattagggatcaatgtgcgtgaacatgacatccgttttgtagag
gacaactgggagagtccggttcttggtgcttggggattgggctgggaagtttggatggat
ggcatggagattacccagttcacatattttcagcagtcaggaagccttccattgctgcct
gtttctgttgagataacatatggacttgaacgcatcctcatgtcccttcagggagttgat
catttcaagaatatacaatacactgaaggaattacatatggagaactattccttgagaat
gagaaggagatgagtgcgtattatttggagcatgcggatgttgatcacattcaaaagcac
tttgatgattttgaagaagaggctcgctctttattatcacttgggctgccaattcctgcg
tacgatcaggttctgaaggcctctcacgcttttaatatcttagattcaagaggttttgtt
ggtgtaacagagcgtgcaagatattttggtcgcatgcggagtcttgctcgtcaatgtgct
cagctttgggtggaaacacgagaggaacttgggcatccattgggcacttatgaagaggct
aatcttatctatcctcatgtctccaaaaagcctagtagggaggaagggcaggggcagcca
cgggcatttgttcttgaaataggaacagaagagttgccaccccatgatgtggtagaagca
actgaacagctagagaaatctctagtgacaatattggagaaacgtagattgagccatggg
aaagtctgttcttatgggacaccaaggagattagcgattgttgttgaaaatttaagtgtg
aagcaaatggaggtagaagttgaactacgtggtccaccagttgcgaaggcatttgaccaa
gaaggaaaacccactaaggcagctgagggattttgtagaaagaataatgtccccatagat
tgtctatacagaagaactgatggtaaaactgaatatatctatgctcgggtcaaagagtct
gcacgctttgctgatgaggtcctaactgaagatctacctagtattatatccggtatttca
tttcccaagtctatgcgctggaactctaatattgtttttagtcgtccgatacgctggatc
ttggcactccatggagattttgttgtgccattttcttttgctagcatctcaagtgggaac
cgatcatgtggccttcgtaactcctctttggctaattttaaggtggaaactgcagaatca
tacttacataatgtggaaaaagctgggatcttgattgatacgaagaaacgcaaagaaaaa
atcttgcatggctctagtatattggcaataggtgttggtggagatttcattgcacctggt
agcttgctgaaggaggttatcaatcttgtggaggcgcctgtgcccattcttggtcgatat
gatgattccttcttagaacttcctaaagatgtattaataacggttatgcagaaacaccag
aagtatttccctgtaatctgcaagaccacaggcaatctgctaccatattttattactgtt
gccaatggtgccgttaaagaagaagttgtctgcaaagggaatgaagctgttctaagggca
aggtatgaggatgccaaattcttttataagatggatacacaaaagaaattttctgaattc
cgaggccagctcagcagcattctctttcatgaaaaacttggcacgatgcttgacaaaatg
acacgtgttgagaatactgttgctgaattgacacttgttctcggaataaatgagagtgtg
gtcccaattatcaaagaagctgctgcgttggctatgtcggatcttgccacttccattgtc
acagagtttacttcacttgctggaattatggcacgccattatgctttgagagatggcctt
ccagaacagattgcagaagcactatttgagataacacttccacggttttctggtgatgta
tttccaaaaacagatgctggcatagtccttgcagttgctgatagattggatagcctagtt
ggtttgtttggagctggatgccagccaagttctacgaatgatccatttggattgcgaagg
gtctcttatggactggtccaaatattggtcgagaacaagaagaactttgacctcaggaaa
gccctgatcttaatggcagaggtgcaacctataaaaatagaaagcaatgttatagatgag
gcagtacaatttgtcacacggaggctggaacaacttctggtggacaggggaatcaactgt
gagatagtccgttcagtgcttatggagcgtgcaaactgcccttatctagcatcacaaaca
gcaattgaaatggaagcattttcaagaacagaaattttttccaaaattgttgaagcatat
tcaaggccgacaagaattatacgtggaaaagaaattgagtctgctttggaggttgatcca
aatgtttttgataaagatgaagaaaaagttttatggagtgcttacttggaggctgccgat
aagattcaccctggtacccaccatgtaggtgttgatatcaaaacatttgccaatgtttct
ctgctcttgatacaacccctagaagatttcttcaacaatgttttcgtcatggcggaagat
gagaaaattcgcaacaaccggctggcgctgctacgaaagattgagagtttgcccaaggga
atagcggacctgtcagttttacctgggttctag
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