Phragmites australis (common reed): 133931054
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Entry
133931054 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133931054
04121 Ubiquitin system [BR:
paua04121
]
133931054
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133931054
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133931054
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133931054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-Nse
zf-RING_16
Zn_ribbon_8
Anti-TRAP
YidB
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
133931054
NCBI-ProteinID:
XP_062233872
LinkDB
All DBs
Position
10:35031432..35035185
Genome browser
AA seq
303 aa
AA seq
DB search
MSSSSFPPSLLRYYCHQCDRDVSIAPPASPDADILCPRCAGGFVEELPPPPHHPFLFDLR
HPSDLSAFFGPPSPASPNFDTSNFLHDHFGGLLSGGATIQIVLEGAPTLAPGLSLGDYFM
GAGGGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMQADGGAQCAVCMDDFH
LGAAAKQLPCNHVFHKDCILPWLDLHSSCPVCRFELPTDDPDHQHQRASAPAASSPRVAE
RRFRISLPWSLRAAFGGATTQAETSNLNTQAQEGRRDDDAPSGGNSSSSNASGGPHRGYD
DLD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtcgtttccaccgtcgctcctgcgctactactgccaccagtgcgaccgc
gacgtctccatcgcccctcccgcctcccccgacgccgacatcctctgcccccgctgcgcc
ggaggattcgtcgaggagctccccccgcccccccatcaccccttcctcttcgatctccgc
caccccagcgacctctccgccttcttcggtccgccctcccccgcctcccccaacttcgac
acctccaacttcctccatgaccacttcggcggcctcctctccggcggtgccaccatccag
atcgtcctcgagggcgcgcccaccctcgccccaggcctcagcctcggcgactacttcatg
ggagccggcggcggcctcgagcagctcatccagcagcttgccgagaacgaccccaaccgc
tacggcaccccgcccgccgccaagtccgccgtcgcggcactccccgacgtcgccgtctcc
gccgacatgatgcaggccgacggaggggcgcagtgcgccgtctgcatggacgacttccac
ctcggcgccgccgccaagcagctcccctgcaatcacgtcttccacaaggactgcatcctc
ccatggctcgacctccacagctcctgccccgtctgccgcttcgagctgcccaccgacgac
ccggaccaccagcaccagcgcgcttctgctcccgctgcctcttcacccagggtggccgag
agaaggttcaggatatcgttgccttggtctctcagggccgccttcggtggtgccaccacc
caggcggagaccagcaatctaaacactcaggctcaggagggcaggagggacgatgacgcg
ccttctggtggcaacagcagcagcagcaatgcaagtggtggtcctcatcgtggatacgat
gatcttgactga
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