KEGG   Phragmites australis (common reed): 133931079
Entry
133931079         CDS       T10575                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
paua  Phragmites australis (common reed)
Pathway
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133931079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:paua04121]
    133931079
Enzymes [BR:paua01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133931079
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133931079
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-ANAPC11 zf-C3HC4_4 Prok-RING_4 zf-rbx1 TRAF3_RING RING_XB3-XBAT31 ANCHR-like_BBOX DUF7560 zf-RING_4 zf-Nse zf-RING_11
Other DBs
NCBI-GeneID: 133931079
NCBI-ProteinID: XP_062233890
LinkDB
Position
10:835424..835993
AA seq 145 aa
MEVDMKPRRVRVSAAANEQTPPSWCSICLEPVVTRCGHLYCRPCMYRWLDSKQHDVGRCP
VCKAAVSEEHLVPLYGRGCSSGTTGSGLHLHSTTCRGPSPTTYFNGIALAVLLPWATTTR
GAERPRPPSMRLNWNGDRRVARRRP
NT seq 438 nt   +upstreamnt  +downstreamnt
atggaggtggatatgaagccccgcagggtgagggtgagcgctgcagccaacgagcagacg
ccgccgtcttggtgcagcatctgcctggagccggtggtgacgcggtgcgggcacctctac
tgccggccgtgcatgtaccggtggctcgactccaagcagcacgacgtcgggcggtgcccc
gtctgcaaggccgccgtctccgaggaacacctcgtgccgctctacggccgtggctgcagc
agcggcactactggtagtggtctgcatctgcatagtacgacgtgccgaggtccgagtccg
accacatacttcaacggcattgccctggcggtcctacttccctgggcgacaactacaagg
ggcgccgagaggccgaggccgccatcgatgcgtctgaactggaatggagacaggagggtg
gcacggcggcgaccatag

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