Phragmites australis (common reed): 133931281
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Entry
133931281 CDS
T10575
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133931281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133931281
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133931281
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Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
DUF5845
Motif
Other DBs
NCBI-GeneID:
133931281
NCBI-ProteinID:
XP_062234118
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Position
10:1745741..1749003
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AA seq
557 aa
AA seq
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MSLISQNALQKRRLEKNGADDGNDKGIGSPVTMDVEVGKEVKSKNYNKERKKKRTKVLEA
QQNKEEEEMRQLEGSLFGSLYVPLEFGTEVGAAGVAPDQDAPLFFTDRSAGEGEDELPIY
EEDLTHEDEEDEVGNKGRKPVWVDKEDERTQVDIVKVARLRKLRKEADEHLISGKEYEAR
LRGQHAKLNPFAGWADMDRKVPPPGASDGESDDEGGVDDILRNNDELVVKGTAKLLPGML
DFSRLVDANVQEPSNGPINSVQFHRNGQLMLAAGLDKHLRFFQIDGKRNPKIQSIFIEDC
PVHKASFLPDGSEVILSGRRKFFYSFDLVNAVVNKIGPLTGREEKSLESFEISPDSRTIA
FVGNEGYILLISSKTKQLIGTLKMNGSVRSLAFVDGGNQLLSSGGDGHVYHWDIGTRKCI
HKAMDDGSLAGVSLCTSQDSSLFATGSTSGVVNVYKRDDFLGGKRKPLKTIENLTTEVGE
MKFNHDAQILAISSRKERNGMRLVHVPSFTVFQNWPGPRFSLHYPRCLDLSPGSGFLSVG
HAGGKVLLYKLHHYQNA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgatatctcagaacgcactccagaagcgtcgtctggagaaaaatggagctgat
gatggcaatgataagggcattggatctcccgttactatggatgtagaggttgggaaggaa
gtcaagtcgaagaattacaataaggaaaggaagaagaagaggactaaggtgctggaggca
cagcagaacaaagaggaggaggagatgcggcaactagagggttcattgtttggttccctg
tacgtgccattggagtttggcactgaggtaggggctgcgggggtggctcctgaccaggat
gcacctttgttcttcacggataggtctgctggtgaaggtgaggatgaattgcctatttat
gaggaggacttgacccatgaggatgaagaagatgaggtgggcaacaaggggaggaagcct
gtatgggtggataaggaggacgagaggacacaggtggatatcgtgaaggttgctaggttg
aggaagctgagaaaagaggctgatgagcatttgatatcagggaaggagtatgaggctagg
ttgcgtggtcagcacgccaaattgaaccccttcgctggctgggctgatatggaccggaaa
gttcctcctcctggggcatcagatggtgagtctgatgatgagggtggagttgatgatatt
cttcggaataacgacgagcttgttgtcaagggtactgctaagctcttacctgggatgctg
gacttttctaggcttgtagatgccaatgtccaggagccatcgaatggtcctattaattca
gtgcagtttcataggaatgggcagctgatgctagctgctggtttggacaagcatctgagg
ttttttcagattgatggaaagagaaaccccaagatccagagcatatttattgaggactgt
ccggtccacaaggcctcctttctacctgatggctctgaggtgatcctttcaggcaggagg
aagttcttctactcatttgatctggtgaatgctgtggttaacaagattggtcctttgaca
gggcgcgaagagaaaagcctggagagctttgagatatcaccagattcaagaaccattgca
tttgtcggtaatgaagggtacatccttttgatttcttccaagacaaagcagctcattgga
accctcaagatgaacggaagcgtgcgttcgttggcttttgtggacggtggaaatcagcta
ctgagcagcggtggagatggccatgtttatcactgggatattggaacaaggaagtgtatc
cacaaggctatggacgacggttccctggcaggtgtttcactttgtacctctcaggacagc
tctttgtttgccactggctccaccagtggcgtagtgaatgtgtataagagggatgatttt
cttggcgggaagaggaagccactgaagacaattgaaaacctcacaaccgaggttggtgaa
atgaagttcaatcatgatgcccagattttggcgataagctcaaggaaggagaggaatggg
atgaggcttgtgcatgtcccatccttcactgtgttccagaactggcctgggcctcgtttc
agccttcactatccaaggtgcttggatctcagtccaggcagcgggtttttgtctgtcgga
catgctggtggaaaagttttgctatacaagctgcaccactatcaaaatgcgtga
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