KEGG   Phragmites australis (common reed): 133931281
Entry
133931281         CDS       T10575                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
paua  Phragmites australis (common reed)
Pathway
paua03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    133931281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:paua03009]
    133931281
Ribosome biogenesis [BR:paua03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    133931281
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_EML Beta-prop_RIG_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_TEP1_2nd DUF5845
Other DBs
NCBI-GeneID: 133931281
NCBI-ProteinID: XP_062234118
LinkDB
Position
10:1745741..1749003
AA seq 557 aa
MSLISQNALQKRRLEKNGADDGNDKGIGSPVTMDVEVGKEVKSKNYNKERKKKRTKVLEA
QQNKEEEEMRQLEGSLFGSLYVPLEFGTEVGAAGVAPDQDAPLFFTDRSAGEGEDELPIY
EEDLTHEDEEDEVGNKGRKPVWVDKEDERTQVDIVKVARLRKLRKEADEHLISGKEYEAR
LRGQHAKLNPFAGWADMDRKVPPPGASDGESDDEGGVDDILRNNDELVVKGTAKLLPGML
DFSRLVDANVQEPSNGPINSVQFHRNGQLMLAAGLDKHLRFFQIDGKRNPKIQSIFIEDC
PVHKASFLPDGSEVILSGRRKFFYSFDLVNAVVNKIGPLTGREEKSLESFEISPDSRTIA
FVGNEGYILLISSKTKQLIGTLKMNGSVRSLAFVDGGNQLLSSGGDGHVYHWDIGTRKCI
HKAMDDGSLAGVSLCTSQDSSLFATGSTSGVVNVYKRDDFLGGKRKPLKTIENLTTEVGE
MKFNHDAQILAISSRKERNGMRLVHVPSFTVFQNWPGPRFSLHYPRCLDLSPGSGFLSVG
HAGGKVLLYKLHHYQNA
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgagcttgatatctcagaacgcactccagaagcgtcgtctggagaaaaatggagctgat
gatggcaatgataagggcattggatctcccgttactatggatgtagaggttgggaaggaa
gtcaagtcgaagaattacaataaggaaaggaagaagaagaggactaaggtgctggaggca
cagcagaacaaagaggaggaggagatgcggcaactagagggttcattgtttggttccctg
tacgtgccattggagtttggcactgaggtaggggctgcgggggtggctcctgaccaggat
gcacctttgttcttcacggataggtctgctggtgaaggtgaggatgaattgcctatttat
gaggaggacttgacccatgaggatgaagaagatgaggtgggcaacaaggggaggaagcct
gtatgggtggataaggaggacgagaggacacaggtggatatcgtgaaggttgctaggttg
aggaagctgagaaaagaggctgatgagcatttgatatcagggaaggagtatgaggctagg
ttgcgtggtcagcacgccaaattgaaccccttcgctggctgggctgatatggaccggaaa
gttcctcctcctggggcatcagatggtgagtctgatgatgagggtggagttgatgatatt
cttcggaataacgacgagcttgttgtcaagggtactgctaagctcttacctgggatgctg
gacttttctaggcttgtagatgccaatgtccaggagccatcgaatggtcctattaattca
gtgcagtttcataggaatgggcagctgatgctagctgctggtttggacaagcatctgagg
ttttttcagattgatggaaagagaaaccccaagatccagagcatatttattgaggactgt
ccggtccacaaggcctcctttctacctgatggctctgaggtgatcctttcaggcaggagg
aagttcttctactcatttgatctggtgaatgctgtggttaacaagattggtcctttgaca
gggcgcgaagagaaaagcctggagagctttgagatatcaccagattcaagaaccattgca
tttgtcggtaatgaagggtacatccttttgatttcttccaagacaaagcagctcattgga
accctcaagatgaacggaagcgtgcgttcgttggcttttgtggacggtggaaatcagcta
ctgagcagcggtggagatggccatgtttatcactgggatattggaacaaggaagtgtatc
cacaaggctatggacgacggttccctggcaggtgtttcactttgtacctctcaggacagc
tctttgtttgccactggctccaccagtggcgtagtgaatgtgtataagagggatgatttt
cttggcgggaagaggaagccactgaagacaattgaaaacctcacaaccgaggttggtgaa
atgaagttcaatcatgatgcccagattttggcgataagctcaaggaaggagaggaatggg
atgaggcttgtgcatgtcccatccttcactgtgttccagaactggcctgggcctcgtttc
agccttcactatccaaggtgcttggatctcagtccaggcagcgggtttttgtctgtcgga
catgctggtggaaaagttttgctatacaagctgcaccactatcaaaatgcgtga

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