KEGG   Phragmites australis (common reed): 133931417
Entry
133931417         CDS       T10575                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    133931417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paua03400]
    133931417
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    133931417
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 POLH-Rev1_HhH PTCB-BRCT IMS_HHH LIG3_BRCT DUF1805
Other DBs
NCBI-GeneID: 133931417
NCBI-ProteinID: XP_062234273
LinkDB
Position
10:3183695..3193443
AA seq 1127 aa
MSSTSSGRRAPPAGAAASPGQKRARDDGSVSPSDTGSAPAKNPRRAFSSSPFADFGSYMA
AKNSKLAAQFDADLSTSGAATGGLFAGVSIFVDGFTVPSSQELKEIMLNNGGRFVNYFSR
HTVTHIVCSHLPDSKMRNLRAFSKGLPVVKPAWVVDSLAENRLLHCSPYQICQHSSLSRK
QTKLSAFFSEKQNGMRCQGELSNQSEDLELQSSSVQEGSQCQSGACESEGSLSNEELPKD
SLSSDEQKSTFEERGSQDFMRDEGEYDCETACSERRGNDLDGKVDTAQSPDAKSRCSNLR
STSSTGSHLPLPLEKNEAKPYSRPHSTLTDPNFVENYFKYSRLHFIGTWRNRYRKRFSNF
LEVKSIKTNHDHSGKKKTIIHIDMDCFFVSVVIRNMSELHDKPVAVCHSDNPKGTAEISS
ANYPARNYGIKAGMFVRDAKARCPHLKVVPYNFDAYEEVADQFYGILHKYCNKVQALSCD
EAFLDMTECLHDNPEEVTWRIRNEIFDATKCTASAGIAENMLVARLATRSAKPNGQCFIP
SEKVDDYLNSLPIKALPGIGHTVSAKLKSKEIEYCGQLRNIPKDVLHKDFGKKIGDLLWN
CCRGIDHSIVGAVQETKSVGAEINWGVRFNDNKDVGPFCFSFLYHYSAMPFHVYSLLCWL
QAEHFLTNLCKEVSLRLQGCGVQGRTITLKVKTRRKDAGEPIKYMGCGDCETASRSMTIA
GATDSFVTLQRIAKQIFAAFCADVKEVRGVGLTMSKLEHADLVRGAPQGNMLESWLGSPS
AKLKKQCSEKIVLLGNVDVAGTSELQDLRTSSPSFQGAASYSSEVNLTSDRSTGVHNVEL
PPISQLDLEVLKNLPPEIISEMNDMYKGELHGFLDTVNSDKGKESSSKSHSMHLEEGTKG
KSDKQLSEVQAANNASCSRASELVEKTTKSVPQLDLMPDSLSQADLTVLQELPDDVKADL
FSTLPLHRSGNPTCSTSNVSGNKSPNVGGAENKSPNDGGADDPGSSQKWIEQFRVSSCLI
LNVIAEQHTDSSSSQPLSSVLEPVASFLPLCPNSGSEEWNETLSCLSELLTQYIQFKVET
DIEELHKCFCLLKRFASASAFFHELHNSILPFLQDSVSQHYGGTLHF
NT seq 3384 nt   +upstreamnt  +downstreamnt
atgagctccacctcctcgggccgccgcgctccgccggctggggcggcggcctctccgggc
cagaagcgggcgagggacgacggcagcgtgtccccttccgacacaggctccgcccccgcc
aaaaaccctcgccgcgcattctcctcctccccgttcgccgatttcggcagctacatggcc
gcgaagaacagcaagctcgccgcacagttcgacgccgacttgtccacctccggcgcggcc
accggcggtttattcgctggcgtttccatcttcgtcgacggcttcaccgtgccctcgagc
caggagctgaaggagattatgctgaacaacggaggtcggtttgttaactacttctcgagg
catacggtgacgcacattgtttgcagccacctgcctgatagcaaaatgagaaatctaaga
gcgttcagtaagggacttcctgttgtgaaaccggcatgggtggtggattccttggcagag
aaccggctcctccactgttctccatatcaaatatgtcagcatagttctttaagccgaaag
cagacgaagctttctgctttcttttcagagaaacaaaatggaatgcgttgtcagggggag
ctaagtaatcaaagtgaggaccttgagttacaatcttcttctgttcaagagggttcgcaa
tgtcaaagtggggcttgtgaaagcgaagggtcattatccaatgaggagttacctaaggac
tcactatcctcagatgaacagaaatctacatttgaagaaagaggtagtcaagattttatg
cgcgatgagggtgagtatgattgtgaaactgcatgttcagagaggaggggcaatgacttg
gatggtaaggttgacacggctcagtcccctgatgctaagtcaaggtgttcaaacttacgc
agtacaagctctacaggcagccatttgcccttgccattggagaaaaatgaagctaaacct
tatagtcgtccacattcaaccctgacagacccaaattttgttgagaattatttcaagtac
tctcgactgcacttcattgggacatggagaaatcggtatcgtaagcgcttctcaaacttc
ctagaagttaaaagcattaagacaaaccatgatcattcagggaagaagaaaacaataatt
catattgatatggattgcttttttgtatctgtcgtcatcagaaatatgtcagagctgcat
gataaaccagtagcagtttgccattcggacaatcctaaaggaaccgcagaaatatcatct
gcaaactatccggcacgaaattatgggataaaggctggcatgtttgttagagatgctaaa
gctaggtgccctcacctaaaggttgttccctataacttcgatgcatatgaggaggttgct
gaccagttctatggtattttgcacaaatattgcaataaggttcaggctttgagctgtgac
gaagcttttttggatatgactgaatgcttgcatgataatccggaggaagtaacatggaga
atcagaaatgagatttttgatgcaacaaagtgcactgctagcgcaggtattgctgaaaac
atgctcgtagctcggttagctaccagatctgcaaagccgaatggacagtgctttattccc
tctgagaaggttgatgattatttgaatagtctccctatcaaagcacttccaggcattggt
catactgtttcagctaaactgaaaagcaaagaaattgaatattgtggccaacttcgcaac
attccaaaggatgtcctccacaaggactttggaaaaaagatcggtgatcttttatggaac
tgttgcagaggaattgatcattcaattgttggagctgttcaggaaaccaaatctgtgggt
gctgaaatcaattggggagtcagatttaacgacaacaaagatgtgggtcctttctgtttc
tcttttctgtatcattatagtgcaatgccgtttcatgtttattctcttttatgttggttg
caggctgagcattttcttaccaacctctgcaaggaggtttctctacgcttgcaggggtgt
ggagtccagggacgtactattacccttaaggttaaaacaagaaggaaagatgctggagag
ccaataaagtacatgggatgtggtgactgtgaaaccgcgagtcgctctatgacgatcgca
ggtgcaactgacagttttgtcactcttcagagaattgcaaaacaaatatttgcagcattt
tgtgctgatgtgaaggaagttcgtggagttggacttacaatgtcaaagctcgagcatgca
gatttggttcggggagcaccacaagggaatatgcttgaatcatggcttggttcaccatct
gcaaagctcaagaaacagtgcagtgagaaaatcgtcttgctggggaatgttgatgtggca
ggaactagcgaactgcaggatttgagaacatctagcccatcatttcaaggtgcggcatcc
tattcatcagaggtgaaccttacaagtgataggtctactggagttcataatgttgagctg
ccgccaatatcccaacttgatttggaggtcctgaagaaccttcctccagagataatatct
gaaatgaatgacatgtacaagggagaattgcatggttttctggacacagtcaatagtgat
aagggcaaggaaagtagttcaaaatctcactccatgcatttggaggagggtactaaggga
aaatcagacaaacagctatcagaagttcaagcggccaataatgcttcatgctcaagggcc
agtgaattggttgagaaaacaacaaaaagtgttccacagcttgatttgatgcccgattct
ctgagccaggcagacttaacggttctgcaggaattacccgatgatgtgaaggctgatttg
tttagcacgcttccattacatagatcaggaaatcctacatgcagcacatccaatgtttct
ggaaataaatctcctaatgttggtggagctgaaaataaatctcctaacgatggtggagct
gatgatccaggaagttctcaaaaatggatcgaacagtttagagttagcagttgcctgata
ttgaatgtaattgcagagcaacacactgattccagctcgagtcaaccattatcttctgtt
ttagagcctgtagcttcgttccttcctttgtgcccaaactcaggtagtgaagaatggaat
gaaacgctctcgtgtctctccgagcttcttacacagtatatacaatttaaagttgaaact
gatattgaagagctccataaatgtttctgccttctgaaaaggtttgcgtcagcatcagcg
ttttttcatgaattacacaatagcattcttccttttctacaggattctgtcagtcagcat
tacggtgggacactgcatttctag

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