Phragmites australis (common reed): 133931420
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Entry
133931420 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133931420
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133931420
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
133931420
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Cep3
Motif
Other DBs
NCBI-GeneID:
133931420
NCBI-ProteinID:
XP_062234276
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Position
10:complement(3221162..3229221)
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AA seq
620 aa
AA seq
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MGVELRRDDMEAAAEAISDSEAFRMVEHVLQSVRMDPFLVDLRDKDQYDILLSIVDSTKK
RSPDDEALLVTTLKALSEAVSKIDIMYHHALLHNIFTMCIWYFHRDTRDALLDLITRLAA
VADQYLRECLQMLVNNFTPPGPLAPFMEQPRWLARKKEIYYQLHESLKMISDTVPLAPRM
LKDIIDRSMPKLFDNKSKMVSFVECMLGLDTDRMGDLIGALLLAKVVDLLMELDVNITWE
DILQEEHNKGIFDMELEDLDEDEDNLGQEGTKTLFGGNACAEKLDGLMVVVCEHLKSCTE
NGRLPKEFDILKTIFRASVLRVHKSKFAQFIMFYACSLDPEICGLEFALFLTDIFTKKEE
DPICRMSAVSYVGSYLSRARFISADTVVGVLKRLVDWCVDYCDLQNSRGMTTKAVNHQIF
YASCQAVMYILCFRLRSIMDYPNLKLQLFQMPIGYIFTHPLEPLKACLPSIVNEFLRQAK
AARLFNASVDSMFEDTIESDLSKAFGGLNILDMFFPFDPYLLKESDRYMRPNFEFWSMAK
TTYNNNSDDDELGDLDAPEMNVGSLDDHVEIDFNSDDDLEYSMNKMSITPHRSFYHPMAT
NSDTGLSMPARIRPSVSPPS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggagctgcggcgcgacgacatggaggcggcggcggaggccatcagcgactcc
gaggcgttccggatggtcgagcacgtgctccagtctgtgcgcatggatccttttctagtt
gatctaagggacaaagatcagtatgatatcctgctaagcattgtagactcaaccaagaaa
aggagtcctgatgatgaagctttgcttgtgacaactttgaaggcactgtcagaagcagta
tccaagattgacatcatgtaccaccatgcacttttgcacaatatatttaccatgtgcatc
tggtacttccacagagacacaagggatgcgcttttggatttaatcaccagattggctgct
gtggctgatcagtatctcagagaatgtttgcagatgcttgtgaacaacttcactccacct
ggaccacttgcgccattcatggagcaaccaagatggcttgcaaggaagaaagaaatctat
tatcagttgcatgagagtttgaaaatgatttctgacactgtacccttagcaccaaggatg
ttaaaggatataatcgataggagtatgccaaaattatttgataacaaatctaagatggta
tcttttgtcgagtgcatgttgggtcttgatactgacagaatgggggaccttattggagct
ttattgctggcgaaagttgtggatctacttatggaattggatgttaatataacttgggaa
gacattcttcaagaggaacataacaaaggtatatttgacatggagcttgaagatttggac
gaggatgaggataaccttggccaagaaggaacaaagaccctttttggaggaaatgcctgt
gccgaaaaacttgacggtttaatggttgttgtgtgcgagcacctcaagtcatgcacagaa
aatggtcgcttacccaaggagtttgatattttgaagactatatttcgagcatctgtgctg
agggtgcacaaatccaaatttgcccagtttatcatgttttatgcctgttcattggatcct
gaaatctgtggtcttgagtttgctctatttcttactgacatttttactaagaaggaggag
gatccaatatgtcggatgtctgcagtttcatatgttggaagctatctgtccagggcaagg
ttcatttctgcggatacagttgttggtgtactcaaaaggttagtggactggtgcgttgat
tattgtgaccttcagaatagcagagggatgacgaccaaggctgtaaatcatcaaatattt
tatgctagctgccaggctgtgatgtatatcctttgctttcgcttgaggtccattatggac
tacccaaatcttaaattacagcttttccaaatgccgatcgggtatatctttacccatcca
ctggagcctttaaaggcatgcttgccttcaatagtaaacgagttcctgagacaggctaag
gctgcaaggctgtttaatgcatctgtggattcaatgtttgaagatacaattgaatctgat
ttatcaaaggcttttggaggacttaatatacttgacatgttcttcccctttgatccatat
ttgctgaaagaatctgacagatacatgcgtccaaattttgagttctggtccatggccaag
acaacatacaacaacaacagtgatgatgatgagcttggggaccttgacgctcctgaaatg
aatgtgggcagcttggatgatcatgttgagatagatttcaacagtgatgatgacttggaa
tattcgatgaacaagatgtccataacgccgcaccgctctttctaccatccaatggctaca
aacagtgatactggccttagcatgcctgcgaggatcaggccttcagtgagccctccatca
tag
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