Paenibacillus sp. URB8-2: PUR_00060
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Entry
PUR_00060 CDS
T10751
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
paub Paenibacillus sp. URB8-2
Brite
Enzymes [BR:
paub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PUR_00060 (gyrB)
DNA replication proteins [BR:
paub03032
]
Prokaryotic type
DNA Topoisomerases
PUR_00060 (gyrB)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PUR_00060 (gyrB)
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BCG56581
UniProt:
A0A810DT04
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Position
4531..6492
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AA seq
653 aa
AA seq
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MKPVQGQSNNLKEVGEGMSMNQPTYDESQIQVLEGLEAVRKRPGMYIGSTSVKGLHHLVW
EVVDNSIDEALAGYCDKIQVIVHEDNSITVIDNGRGIPVGENTKLKKSTLEVVMTVLHAG
GKFGGGGYKVSGGLHGVGISVVNALSEKVVVTVKREGHVYQQEYRRGAPQYDIRMIGDTE
ETGTKTTFHPDPEIFTETTVYEYNTLLTRIRELAFLNKGIEISLTDERTGTVNTFKYDGG
IIEYVKFLNEKKEVLHEEPIYVGGSRDMIQVEVALQYNDSYTENIYSFANNIHTHEGGTH
ESGFKSALTRIINDYARKSGIIKDNSSNLTGDDVREGLTAIISVKIPEPQFEGQTKTKLG
NSEVRGIVESLFGEKLQEFLEENPAISRRVLDKSLQASRAREAARKARELTRRKSALEVS
ALPGKLADCSSKDASISELFIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRI
LSNAEIRAIITALGTGIGDDFDLSKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRKIV
DAGFIYIAQPPLFKVERNKVVRYAGSEKERDEIIATFGDNAKFNVQRYKGLGEMNATQLW
ETTMDPESRSMLQVTIEDAILADSIFDTLMGDNVEPRRDFIQEHAKTVKNLDV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcccgtccagggccaaagtaataatctgaaagaagtaggtgaaggcatgtcaatg
aatcaaccgacatatgatgagagccagattcaggtgcttgaagggctggaagcggtccgc
aagcgtccgggcatgtacatcggttcgaccagcgtaaagggcttgcaccatctcgtatgg
gaagttgtcgataacagtattgacgaagcgttggccggttattgcgacaaaatccaagtt
attgtgcatgaggacaacagtataaccgtaatcgacaacggacggggaattcctgtcgga
gagaacacgaagctgaagaaatcgacgcttgaagtcgtcatgaccgtcctgcatgcaggg
ggcaaattcggcggcggcggatataaagtatcgggcggcctgcatggggtgggtatttcg
gtagtgaatgccctctcggaaaaagtggttgtcacggttaagcgtgagggacatgtgtac
cagcaggaatatcgccggggggcccctcagtacgacattcggatgattggcgataccgaa
gagacggggactaagacgactttccacccggacccggagatttttaccgaaacgaccgtg
tatgaatataatactctccttacccggattcgcgagctggcattcttgaataagggaatt
gaaatctctctcacggatgagcgaaccggtacggtgaacacgttcaagtacgatggcggc
ataatcgaatacgtgaagttcctcaacgagaaaaaagaagtgctgcatgaggaacccatc
tatgtgggcggttcgcgtgatatgattcaagtcgaagtggcgcttcaatacaacgattcg
tacaccgaaaatatttactctttcgccaataacattcatacccatgagggcggaacgcat
gaatccggattcaagagtgccttgacgcggattatcaacgattatgcccggaaaagcggg
atcatcaaggataacagctccaatctgaccggagacgatgtccgtgaaggactgacggcg
atcatttccgtgaagattcccgagccgcagtttgagggtcaaacgaagacaaagctcggc
aacagcgaggttcgcgggattgtggaatcgctgtttggcgagaagctgcaggagttcctt
gaggagaacccggccatttcccggcgcgtcctggataaatcgctgcaggcttcccgggcg
cgtgaagcggcgcgcaaagcccgcgaactgacgcggcgcaagagcgctcttgaagtcagt
gcgctgccgggcaagctggccgactgctcgtccaaggatgcttccatcagcgagttgttc
atcgtcgaaggcgactctgccggcggatcggctaagcagggacgtgaccggcattttcag
gcgattttgccgctgcgcggtaaaattctgaacgtggagaaggcgcgtctggaccgcatc
ttgtccaatgcagagattcgggccattattaccgccttgggaacgggaatcggcgatgac
ttcgacctgtcgaaggcgcgttaccacaaggttgtcatcatgacggatgcggatgtcgac
ggcgcccatatccgtactctgctgctgaccttcttttaccggtatatgcgcaaaatcgtt
gacgcgggctttatctacatcgcccagccgccgctgttcaaagtggaacgcaacaaggtg
gtgcgctacgccggctcggagaaggagcgcgacgagattatcgccaccttcggagacaac
gccaaatttaatgttcagcgctataaaggccttggagagatgaatgccacgcagctctgg
gaaacgacaatggatcccgaaagccgcagtatgctgcaggtaacgatcgaagacgccatt
ctggcggatagcattttcgatacgctgatgggcgataatgtggagccacggcgcgatttt
atccaggagcatgccaaaacggtcaagaatctcgatgtttaa
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