Paenibacillus sp. URB8-2: PUR_02580
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Entry
PUR_02580 CDS
T10751
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PUR_02580 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_02580 (alkA)
Enzymes [BR:
paub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PUR_02580 (alkA)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PUR_02580 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
OGG_N
Motif
Other DBs
NCBI-ProteinID:
BCG56833
LinkDB
All DBs
Position
286796..287713
Genome browser
AA seq
305 aa
AA seq
DB search
MWRRPDMNDLLFELPLPELFDWKACLDYMARSPLECLYRTDGEGVTRLLQADGTALLVRL
TVPEPGRLRVELLEGERPGEAGLEDLVRYIRDWFDLDRDLRPFYKLAEGDPLLGPLAERF
RGLRIVGIPDLFEALCWAILGQQVNLAFAYKLKARIAEQYGESVLWAGHRYHLFPPPESL
LGAKEEELCALQLSRSKARTILAVADLLAGGALSREELLALGSPEEAEAMLTAVRGIGPW
TAQYVRMRCLRDASSFPIGDVGLHNAVKAVLGMDRKPTLPELRELFADWRGWEAYATFYL
WRVLY
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggcggccggacatgaacgatttgctttttgagctgccgctgccggaactgttc
gattggaaagcctgcctcgactatatggcgcgttcgccgctggaatgtctgtacaggacg
gacggtgaaggagtgacccgcctgcttcaggcggacggaacggcgctgctggtccggttg
acggtgccggagccggggcggctgcgggtggagctgctggaaggggagcggcccggggaa
gcgggattggaagacctggtgcgttatatccgcgactggttcgacctggaccgcgatctt
aggccgttctataagctggcggagggcgatcccttgcttggtccgctggcggaacgcttt
cgcggcctgcgcattgtcggcatccccgacttgttcgaggccttatgctgggcgattctt
ggacagcaggtcaacctggccttcgcgtacaagctgaaggcgcggattgcggaacaatac
ggcgagtccgtgctgtgggccggacaccggtaccatctgtttccgccgccggagtcgctt
cttggcgcgaaggaggaggagctgtgcgccctccagctgagccggagcaaggcgcggacg
attcttgccgtcgccgatcttctagccggcggcgcgctgagccgggaggaactgctggcc
cttggctcgccagaggaggccgaagcgatgcttacggcggtgcggggcatcggcccctgg
accgcccagtatgtaaggatgcgctgcctgcgcgacgcctcgtcttttcccatcggggat
gtcggtctgcacaatgccgtcaaagccgtgcttgggatggaccggaagccgacgctgccg
gaactcagggagctgttcgcggattggcggggctgggaggcgtatgcgaccttttatttg
tggcgggtgctgtattga
DBGET
integrated database retrieval system
