Paenibacillus sp. URB8-2: PUR_02850
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Entry
PUR_02850 CDS
T10751
Symbol
pcrA_1
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub03420
Nucleotide excision repair
paub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PUR_02850 (pcrA_1)
03430 Mismatch repair
PUR_02850 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_02850 (pcrA_1)
Enzymes [BR:
paub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUR_02850 (pcrA_1)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PUR_02850 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
PUR_02850 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
AAA_12
IBR_2
DUF6953
Motif
Other DBs
NCBI-ProteinID:
BCG56860
UniProt:
A0A810DTG0
LinkDB
All DBs
Position
complement(317987..320434)
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AA seq
815 aa
AA seq
DB search
MTIIMNKLLFHPVPPGAAATRVPRAAAASAKTSRELVRGDEPDAGYFRTLERDGILLNAS
QIAAVRHGDGPLLTLAGAGSGKTSVLVCRTGYLLSVRRVSPGRLLLLTFSSRAAAEMRER
IGRLPGIGGMELSGLQARTFHSFFLYFLRRQGVRQEIFHETRRQHILLKAIMRELGLPKD
AYPPESLLSLLSSCKMNMGDAGSLPELTNADKEIKEILKRYEQWKQDNGKIDFDDVLLHA
YRMLQERPELLAELQRTYLYIMVDEFQDTNALQYELIRMIARPRSNLMVVGDDDQTIYSF
NGARSEFILEFEQLYPEAKVITLDINYRSGPAIIGLGNGIIRGNTRRRPKTLRAAAPEGV
QPRYLRPYTADEEAEAIVEYIVSAVEQGVRSYGDFAVLYRASSSSRAVLERLLLRDIPYI
DYGEGRLLYEHWLISPVVGHLRLTVNRRNFAAMEDMLPTLYVSREQGMAHIHRMEADQPK
QGPLIHLLSLPGLADFRQTAIRERLDMLRHLRELTPLQAIRQIRSRFYDSFVLADERHQA
TLHRETLKEMLDELELSAGRFGSIPLFLDFIDEVTSRNEHHRLPGGTEQGDRVALMTIHK
SKGLEFPVVVLLGASEGILPHSSALDAGRLKDRQTAEGGGEALALMEEERRLAYVAVTRA
KEELLVSSPALHRGRKAPVSRFMLAAFGAAGAAGAGDGGAGDGRQGARSGGGNAGSGAGL
GGRAAAAGADADSSTGRGGYGGGAARHGRSGGADGRGAGAAASGRTRTVAAWSCPDAACP
GWMRVKSGGAEDHLAHKPCPLCSTPMERGSRDVPV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtgactattatcatgaacaagctgctgtttcatccggttccgccgggagccgccgcaacc
cgtgtcccgcgggcggcggcggcttcggcgaagacgagccgggagctggtgcgcggtgat
gagccggatgccggctatttcaggacgctggagcgggacggcattctgctgaacgcttcg
cagatcgcggcggtgcggcacggcgacggcccgctgctgacgctggcgggcgccggttcc
ggcaagacgagtgtactggtctgccggacaggctacttattgtccgtgcgccgcgtttcg
cccggacgtctgctgctgctgacgttctccagcagggcggcggctgaaatgcgggagcgg
atcggcaggctgcccgggatcggcggaatggaactttcgggactgcaggcccgcacgttc
cattctttttttctgtactttctgcggagacagggagtccggcaggagattttccatgaa
acgcgccgtcagcatattctgcttaaagcgatcatgcgggaactgggcctgcccaaggac
gcatacccgccggaaagtctgctctctcttctgtcctcctgcaaaatgaacatgggcgat
gcgggcagccttcccgagctcacgaatgcggacaaggaaatcaaggagattttaaagcgc
tacgagcagtggaaacaggacaacggcaaaatcgacttcgacgatgtgctgctgcacgcc
taccggatgctgcaggaacggccggagctgcttgcggagctgcaaagaacttatctatat
ataatggtcgatgaatttcaggatacgaacgcgctacagtacgagctgatccgcatgatc
gcccgcccccggagcaatctgatggtggtcggcgacgacgatcagacgatctattcgttc
aacggagcgcggagcgagttcattcttgaattcgagcagctgtaccctgaggccaaggtg
attacgctcgacatcaactaccgctcaggccccgccatcatcggcctcggcaacgggatt
atccggggcaacacgcggcggcgtcccaaaacgctgcgtgcggcggcgccggaaggcgtc
cagccgcggtacctccgaccctacacggccgacgaggaagcggaggccatcgtggagtac
attgtttccgccgtggagcagggtgtgcggagctacggcgatttcgccgtgctgtaccga
gcatccagcagcagccgcgccgtgctggagcggctgctgctgcgcgacatcccttacatc
gactacggcgaaggccgtctgctgtatgagcattggctcatttcgccggtcgtcggccat
ttgcggttgacggtgaaccggcggaattttgccgccatggaggatatgctgcctacactc
tatgtaagcagagagcagggaatggcgcatatccaccggatggaggcggatcagccaaaa
caggggccgctgatccatctgctgagcctgcccgggctggcggactttcgccagacggcc
ataagggagcggctggacatgctccgccatctgcgggagctcacgccgctccaggcgatc
cggcagatccgcagccgcttctatgattccttcgtcctggcggacgagcgccatcaggcg
acgctgcaccgggagacgctgaaggaaatgctggacgagctggagctgtcggcgggacgc
ttcggcagcatccccctatttcttgatttcattgacgaggtgacgtcaagaaacgagcat
caccggcttcccggcgggaccgagcagggcgaccgcgtggcgctgatgacgattcacaag
tccaaagggctggagtttcccgtcgtcgtgctgctcggcgcgtccgaaggcattctgccg
cacagctcggcgctggatgcgggccggctgaaggaccgccagacggcggaaggcggcggt
gaagcgctggcgctgatggaggaagaacgccgcctggcgtacgtggcggtcacccgcgcc
aaggaagagctgctggtcagctcgcccgcgctgcaccggggcaggaaagccccggtctcc
cgctttatgctggcggcgttcggcgcagccggggcggcgggcgcaggcgacggcggcgca
ggcgacggccggcaaggcgcccggtccggcggcgggaacgccggcagcggcgcgggcctg
ggcggacgcgcggcagctgccggcgctgacgcggacagctccaccggccgcggcggatat
ggcggcggcgcagcccgccatgggcgctccggcggcgccgatggcaggggcgccggagca
gccgcttccggccgcacgcgcacggtcgcggcctggagctgcccggacgcggcctgcccg
ggctggatgcgcgtcaagtccggcggcgccgaagaccacctggcgcacaagccctgcccg
ctgtgcagcacgccgatggagagaggcagccgggacgttccggtgtag
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