Paenibacillus sp. URB8-2: PUR_07450
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Entry
PUR_07450 CDS
T10751
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
paub Paenibacillus sp. URB8-2
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paub03009
]
PUR_07450 (rlmCD)
Enzymes [BR:
paub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PUR_07450 (rlmCD)
Ribosome biogenesis [BR:
paub03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PUR_07450 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_25
MTS
PrmA
Cons_hypoth95
Methyltransf_11
Methyltransf_12
PCMT
eIF4G1-like_eIF4E-bd
Methyltransf_23
Methyltransf_32
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
BCG57320
UniProt:
A0A810DUT1
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Position
819613..821187
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AA seq
524 aa
AA seq
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MNNNRSGRRHSRRDSSAGVAGLPVNKNDEVVLDIIGMTHEGEGVGRVEGYTLFVQGALPG
EKVRAKVLKTKKQYGYAKLLELVEASASRIAPPCPIYDQCGGCQLQHMDYAAQLKWKRQL
VVDNLERIGKLDVVKDGAGVPLGERKRIGEPGERDCEADGEVLAGAPLEGNAAPGEVSRR
GGIVVRPTLGMDEPWRYRNKAQVPIGTADGGLVGGFYARGSHRIIDMETCLIQHEHNDEV
VRRVKEIGSELGISAYNEETGRGLLRHVVVKKAFRTGEMMLVLVTNGRDIPHVDAWIGSI
REQLPEVASICQNVNTERTNVIFGDKTRVLWGRDVIYDYIGDVQFAISARSFYQVNPTQT
EVLYGKTVEYAGLTGRETVIDAYCGIGTISLFLAQHADRVYGVEIVPEAIEDARSNAKLN
DMNNVVFEVGASEDVIPNWKEQGITADVIVVDPPRKGCDPRLLETILEMKPERVVYVSCN
PSTLARDLRVLEDGGYKTVEVQPVDMFPWTVHVESVALLVQKDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaccgcagcggccgccgtcacagccgccgggacagttcggcgggagtcgcc
ggactgcctgtaaataaaaacgatgaggtcgtgctggatatcatcggcatgacgcatgaa
ggcgaaggggtaggccgggtagagggctataccctttttgtgcagggggcgcttcctggt
gagaaagtccgggctaaggttcttaagacaaagaagcagtacggatacgccaagctgctg
gagcttgtagaggcaagcgcttcccgcatcgcgccgccctgcccgatctatgaccagtgc
ggcggctgccagctccagcatatggactacgccgcccagctgaaatggaagcggcagctt
gtggtggacaacctggagcggatcgggaagctggatgtggtgaaggatggggcaggagtg
ccgctgggcgaacggaagcgaatcggagagccgggtgagcgtgactgtgaagcggacgga
gaagtgctggcgggagctccgctggaagggaatgctgctccgggcgaggtgtcccgtcgc
ggcggtatcgtggtgcggccgacgctcggcatggacgagccctggcgctaccgcaacaag
gctcaggtcccgatcggcactgccgacggcggcttggtcggcggattctatgcgcgtggc
agccaccggattatcgacatggagacctgtctgattcagcatgagcataatgacgaagtc
gttcgccgggtcaaggagatcggaagcgagcttggcatcagcgcgtataacgaagagacc
ggacgcgggctgctgcggcatgtcgttgtgaaaaaggcgttccgcacgggtgaaatgatg
ctggtgctggtaaccaacggccgggatatcccgcatgttgacgcctggatcggtagcatc
cgcgagcagcttcctgaagtagcaagcatctgccagaacgtgaacaccgagcggacgaac
gttatcttcggcgacaagactcgcgtattgtggggcagagacgttatttatgactatatc
ggcgatgtgcagttcgccatctccgctcgttcgttctaccaagtgaacccgacgcagacc
gaagtgctgtacggcaagacggtcgaatacgccggactgaccggccgcgaaactgtcatc
gacgcctactgcggcatcggcacgatctccctgttcctggcgcagcatgcggatcgggtg
tatggcgtagaaatcgttcctgaagccatcgaggatgcacggtcgaacgcgaagcttaac
gatatgaacaatgttgtgtttgaggtcggcgcatcggaagacgttattccgaactggaaa
gagcagggcatcaccgccgacgtcatcgtcgtcgatcccccgcgcaaaggatgcgatccc
cgcctgctagagacgattctggaaatgaagccagagcgcgtggtgtacgtgtcctgcaac
ccgtcgacactggcaagggatttgcgggtgctggaggacggagggtataagactgtggaa
gtgcagccggtggatatgtttccgtggacggtgcatgtggagtcagtggcgttattagtg
caaaaggacaagtaa
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