Paenibacillus sp. URB8-2: PUR_15180
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Entry
PUR_15180 CDS
T10751
Name
(GenBank) ATP-dependent DNA helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
paub Paenibacillus sp. URB8-2
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_15180
Enzymes [BR:
paub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUR_15180
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PUR_15180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCG58093
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All DBs
Position
1662749..1665997
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AA seq
1082 aa
AA seq
DB search
MVDDQTARERILEVLDRTLMVEAGAGSGKTTSLVGRMIALIKSGSAGAEQIAAITFTRKA
ADELKSRFRLELERQIRKAIEPEQALLQQALKEIDRCYIGTIHSFCGRLLRERPIEARLD
PMFREIEEDEANLLRDQCWDEYLVSLIENGQENIMAGLASLQVNVEDLHQVYKRVCDYTD
VHIETVDSPRPNFDLIRCSLPKMIEEAGRYIPTQKPEQGWDTLQTLVRDGKRMLDLHGLD
DDMRMLQLALMFDRKIDATLKRWTDTAMAKEYKGMFQEWQSRVLFPFLCAWREHLYPQLI
DFVRPAVDYGSHKRNELGVLDFQDLLMRATALLREHEHVRRFFAARYTRLFIDEFQDTDP
IQAELMFLLTGDDPGEANWRRITPKPGSLFIVGDPKQSIYRFRRADISTYNWVKNKISTC
GEVLQLSANFRSIHHLGQFTNDEFNTRFPETESEHQAAFVHMDTRTANPENGIQHGVYTM
THAKMAGGQAAIAEADADRAARYIAWACSGQLKIQEKQPGSDGGFLVRDASPSDFLVLLK
RKDFLHIYAAKLDQYGVPSVTAGSSAIYEEIDALAVLASCLNDPGDLVSLLAVLKGMLFC
VSDNALFHYKMEGFPINYTTLPNQAEVGEIAYPVYEALVRLAEYTAMIRRLPAISALLYI
IEDLGMIPLAAVRQTGRARAGTLIKLLHLLHKDSLVAANWPELSLYLMRVVKEAKLECGD
LFAGEQDAVRIMNLHKAKGLEAPVVLLACPCGESDHDATEHVDRMGDSSRGYFSITRRRG
YQEDVIAHPPGWEGLAERERLYMNAEKERLLYVAATRAKQLMIISRYPDRPAIDPWSSFD
TGIQEDRELDDLEVMTEVPSRYEGVHDETADENNGRQWRSRLAQPTYQTASVTKLVKTRA
VQPPRPLAGRGMAFGSVVHRCIELLGSGAESEQMELHIRMIAEEEGMNEALIPDVHAMLE
EVVNHPLWRRALVAKRWIHELPLRTVRTDLELDLESEASTAGSTAKALYLKGVIDFLFEE
EDGWVIIDFKTDVYEERQQAAFVEFYRPQVGAYREELERAFGMTVKEMGLYFLHGGEYVV
LE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
ttggttgatgatcagacggccagagagcgaattctagaggtactagaccggacattgatg
gtggaagcaggggcaggatcagggaagacgacatcactcgttggccggatgattgcattg
attaagtcagggagcgccggggccgagcagattgcagccattactttcacgcggaaagca
gcggatgaactgaagagccggttcagactggagctggagcggcagatccgtaaggcgata
gagccagagcaggcactgctgcagcaggctttaaaggagatcgatcggtgctacattggc
acgattcattctttttgtggcagactgcttagggagagaccgattgaggcgagactggat
cctatgttccgtgaaattgaagaagatgaagcgaacttgctgcgggatcaatgctgggat
gagtatctagtgagtttgatcgagaacggtcaggaaaatattatggcgggccttgcgtcc
ctgcaagtgaatgtggaggatctgcatcaggtgtacaaacgggtatgtgactacacagac
gtacatattgagacggttgactctccaagacctaactttgaccttattcgatgttctctg
cccaagatgatagaagaagcaggtcgttatattccaacacagaaaccagagcaaggctgg
gatacgctgcagacactggttcgtgatggcaagagaatgttggatttacatgggcttgat
gatgatatgcgaatgctgcagctcgcactgatgttcgatcggaaaatcgatgctaccttg
aagaggtggacagatactgctatggccaaggaatataaaggtatgttccaggagtggcaa
agccgtgtcttgtttccctttctttgtgcttggcgggagcatctatatccgcagttgatt
gattttgtcagaccagctgttgattatggctcacacaagcgaaacgaactaggcgttcta
gactttcaggatctactgatgcgggcaacagcgttactccgtgagcatgagcatgtacgg
cgtttttttgctgctcgttatacacgtctgttcatagatgaatttcaggacacggatccc
attcaggcagagctcatgtttctgctgacaggtgatgacccaggagaagcgaattggaga
cggattacacctaaaccgggatccttatttattgttggagatcctaaacagtcgatctat
cggtttcgccgcgcggatatttctacctataattgggtcaagaacaagatcagtacctgt
ggtgaggtccttcagctaagtgctaattttcggtctattcaccatcttggtcaattcact
aatgatgaatttaatacccggtttccagagactgagtctgaacatcaggcggcttttgta
catatggatacacgaacagctaatccggagaatggtatacagcatggagtctacacgatg
actcatgcgaaaatggctggaggtcaggcagcgattgccgaagcagatgcagatcgggcc
gctcgttatattgcatgggcttgcagtggtcaattgaagattcaggagaagcagccggga
agtgacggtggtttccttgtaagggacgcatcaccgagtgatttcctggtactcctgaaa
cgaaaagatttcttacacatctacgctgcaaagctggatcaatacggagttccctctgtt
acggctgggagttcggcgatatacgaagaaatagatgcgcttgctgtgcttgcaagttgt
cttaacgaccccggagatctggtatccctgttagctgtgctgaagggtatgttattttgt
gttagtgataatgcactcttccattataagatggaggggttcccgattaactatactact
ttaccgaatcaggcagaggtcggggaaatagcttatccagtatatgaagcgctggtacga
ctcgctgaatacacggctatgattaggaggttgccggcaatatcggcactgttatatata
atagaggatctagggatgattcctctcgcagcagttcgtcagaccggccgggcgcgtgcc
ggaacattgatcaagctgctgcatctgctgcacaaggacagcctagttgcagcaaattgg
ccggaactgagcttgtatctaatgcgggtcgtaaaagaagcgaagctagagtgcggagat
ctgttcgcaggtgagcaggatgctgttcgcatcatgaaccttcataaggccaaagggctt
gaggcaccagtggtacttttagcttgtccctgcggggagtctgaccacgatgccacagag
catgtggaccggatgggggattcctctcgcggatacttcagtatcacgcggcgaagagga
tatcaagaggatgtgatcgcccatccaccagggtgggagggactcgccgaacgagagcga
ttgtacatgaatgctgaaaaggagcggctgctgtatgtcgccgctactcgcgcaaagcag
cttatgatcattagccgatatccggaccgtccagccatcgatccctggagcagcttcgat
actgggattcaggaagatagagagctggatgatcttgaggttatgactgaggtgccttca
cgttacgaaggggtacatgatgaaacggcagatgaaaataatggccgtcagtggcgaagc
cggctggcacagccgacgtaccagacagcatcggtaacgaaactagtcaagaccagagct
gtccagccccctaggccgcttgcgggaagaggtatggcattcggcagcgtggttcatcgc
tgcattgagctgcttgggagtggcgctgaatccgagcagatggagctgcacatcaggatg
attgccgaagaagagggtatgaatgaagcattgatcccggacgtgcatgcgatgctggag
gaagtggtgaatcatccgctgtggcgacgtgcgctggtggcgaagcggtggattcatgag
cttccgctacgtacggtgaggacggatctagaactggatctggagagcgaagcttcgaca
gcaggttcaacagcaaaggccctgtatttgaaaggcgttattgacttcctctttgaagag
gaggacggctgggtgattattgattttaaaacggatgtgtatgaagaaaggcagcaggca
gcatttgtggaattttatcggccgcaggtgggggcttatcgggaagagttggagagggcg
tttgggatgacggtgaaagagatggggctttattttttgcatgggggtgagtatgttgtt
ctagagtag
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