Paenibacillus sp. URB8-2: PUR_23800
Help
Entry
PUR_23800 CDS
T10751
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub03022
Basal transcription factors
paub03420
Nucleotide excision repair
Brite
Enzymes [BR:
paub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUR_23800
Transcription machinery [BR:
paub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PUR_23800
DNA repair and recombination proteins [BR:
paub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PUR_23800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BCG58955
UniProt:
A0A810DWW3
LinkDB
All DBs
Position
2646574..2648292
Genome browser
AA seq
572 aa
AA seq
DB search
MIKGPCVVRRDWTVLLDCGHPEFEAVRDRLPAFAELAKSPPLYQTYRITPLSLWNAAALG
ASPDEIIESLEQWSRRVLPSGLAEEIKLLMSRYGRLTLHAMDESERLLLRSDSEELLNEP
EMGQVAAACGFRRTGPLEMAGSASCRGMLKQELARTGYPVLDRAGYHEGEALDICWKEGD
CTFELRDYQREAARRFDISGGSGIVVLPCGAGKTIVGLAVLEALKCETLILTSSATSVRQ
WTEELKKRTNLAPECVGEYTGERRQVRPVTVATYQMLTHRASKGGGFSHMGLFNERNWGL
IVYDEVHLLPAPVFRATAEIQATRRLGLTATLVREDGREGDVFSLIGPKAYDCPWKTLEQ
RGWIAAVQCLEVPVPMEPELKKRYLYAASKEKFRLASANPAKAEMAAKIIEAHRGASILV
IGQYLDQLGELAAIIGAPVITGKTPQQERIKLYNQFNEGVLPVLIVSKVANFAVNLPDAS
VAIEVSGAFGSRQEEAQRLGRVLRPKRGDNRAFFYTLVTEDSREQEFALRRRLFLTEQGY
EYFVVHEPAVEKGESFMLPGCGNPLEEEASGS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgattaagggaccctgtgttgtgcgcagagactggacggtgctgctggattgcggtcat
ccggaattcgaagccgtccgcgacaggctgccggcgttcgcggagctggccaaaagtccg
ccgctctatcaaacctaccggataacgccgctgtcgctgtggaacgcggccgctctggga
gcgtcgccggacgaaatcattgagagcctggagcaatggtcaaggcgcgtactgccctcc
gggctcgctgaagaaatcaagctactgatgtccagatacggaaggctcacattgcatgca
atggacgaatctgagcggctgcttcttcgcagtgacagcgaagagcttctgaatgagccg
gagatgggtcaggtcgccgcggcctgcggcttccgcagaacagggccgctggaaatggcc
ggaagcgcatcctgccgggggatgctgaagcaggagctcgcccgaaccggatatccggtg
ctggaccgcgctggctatcatgaaggcgaagcgctggatatttgctggaaagaaggagac
tgtacctttgagctcagggattaccagcgggaagcagcccggcggttcgacatttcagga
ggcagtggaattgtggttctgccctgcggcgcgggaaagaccatcgtcggcctggccgta
cttgaagctttaaagtgcgagacgctcattcttacctccagtgcgacctccgtccgccag
tggacagaggaattgaagaagcggacaaatctggctccggaatgcgtaggggagtacacg
ggggaacggcggcaggtgcggccggttacggtcgcgacctatcagatgctgacgcaccgc
gcctccaaagggggcggcttctcgcatatggggctgttcaacgaacgaaattgggggctg
atcgtatatgatgaagttcatttgcttcccgctcccgtcttccgggcaaccgcagagatt
caggccacacgtcgtcttgggcttaccgccacgcttgttagggaagacggaagagagggc
gacgttttttctctgatcggccccaaagcctatgactgcccctggaagactctggagcag
cggggctggattgccgcggtacagtgtctggaggtaccggtgccgatggaaccggaactg
aagaaacgctatttgtacgcggcatctaaagagaaattccgtctggcttctgccaatccg
gccaaagccgaaatggcggcaaagatcatcgaggcccacaggggggcgtccattctggtc
atcggccaataccttgatcaattgggagagcttgcggcaatcatcggcgctccggtgatt
accgggaagacgccgcagcaggagcggattaagctgtacaaccaatttaacgagggtgta
ttgccggtgctgatcgtatccaaggtcgccaactttgccgtcaatctgccggatgcttca
gttgccatcgaggtgtctggcgcattcggctcccggcaggaggaagcgcagcggttgggc
agagtgcttcgcccgaagcggggggacaaccgggccttcttttatacgctggtgacggag
gacagcagagagcaggagttcgcactgcggcggcgcctgtttctgacggagcagggttat
gaatatttcgtggttcatgaaccggccgtagaaaaaggtgaatcgttcatgctgccggga
tgcggaaacccgcttgaagaggaggcttctggatcataa
DBGET
integrated database retrieval system
