Paenibacillus sp. URB8-2: PUR_31220
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Entry
PUR_31220 CDS
T10751
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paub Paenibacillus sp. URB8-2
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paub03032
]
PUR_31220 (topA)
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_31220 (topA)
Enzymes [BR:
paub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PUR_31220 (topA)
DNA replication proteins [BR:
paub03032
]
Prokaryotic type
DNA Topoisomerases
PUR_31220 (topA)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PUR_31220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Auto_anti-p27
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BCG59697
UniProt:
A0A810E3J1
LinkDB
All DBs
Position
complement(3428976..3431075)
Genome browser
AA seq
699 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQIGVEVENDFNPKYITIRGK
GSVLKELKDASKKVKKVYLAADPDREGEAIAWHLAHALDLDNTQDCRVVFNEITKQAVKD
AFKSPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIIMDREN
EISAFVPEEYWTITAKLGIRDSIFDAKFHRLNGEKKELGRESDVQEVLKAIEGADFIVNE
VKEKERQRHPSAPFTTSSLQQEAARKLGFRAAKTMSVAQQLYEGVELGKEGTVGLITYMR
TDSTRISATAQEEAKELISGKYGENFLPETPRQYSKKAAGAQDAHEAIRPTSALREPDTV
KEFTSRDQFRLYKLIWERFVSSQMASALLDTLSVDIAVGKAMFRAVGSKVSFPGFMKVYV
EGNDDGTTEEEKYLPQLQAGDKLVKQEIDPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELVIEQMEQFFPEILDVEFTAHMEGDLDHVEEG
AEDWVKVLAEFYNSFEKRLEVAEEEMKEIEIVDEVSDEICEKCGKPLVYKLGRFGKFLAC
SGFPDCRNTKPIIKDIGVGCPKCHEGKVVERRSKKGRVFYGCDRYPECDFVSWDKPSSKP
CPECGTWMIEKRNKQGVRLQCTSCDHTENLEDNEEEAAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtggctgattctttggtcattgtcgagtcgcctgcaaaggcgaagaccatcggcaaatat
ttgggcagcaaatatattgtaaaggcatctatgggacatgttcgcgacctgcccaaaagc
cagattggtgtggaggtcgagaatgactttaatcccaaatatattaccatccgcggcaaa
ggctcggtgctcaaagagctgaaagacgcgagcaaaaaagtgaaaaaagtctatctggcg
gctgacccggaccgcgaaggagaggcaatcgcctggcatttggcgcatgcgctggatctg
gacaatacgcaggactgccgtgtcgtgttcaacgaaattacgaagcaggccgtgaaggat
gctttcaaatccccgcgcaaaatcaatatggatctggtcaacgcccagcaggcgcggcga
atactagacaggctcgtcggttataaaatcagccctttattatggaagaaagtcaaaaag
gggttgtcggccggacgcgttcagtcagttgccgttaaaatcattatggaccgtgagaat
gaaatctcagcgttcgtgcctgaggaatactggaccattacggctaaactcggtatccgg
gattccatattcgacgccaagtttcacagattaaatggtgagaaaaaggaacttggacgc
gaaagcgacgtacaagaagtattaaaggcgattgaaggcgcagattttattgtcaacgaa
gtgaaggaaaaagaaagacagcgccatccgtcggcgccattcacaacgagctcccttcag
caggaggcggcgcgcaagctcggattccgggcagccaagaccatgtccgtcgcccagcag
ctgtatgagggtgtggagcttggaaaagaaggcactgtcggtctgattacgtatatgcgt
accgactccacccggatttccgcgactgcgcaggaagaagcgaaggaactgatatccgga
aagtacggggagaactttttgccggaaacaccgcgtcaatactccaagaaggccgctgga
gcccaggatgcgcatgaagcgatccggccaacctcggcactgcgcgagcctgacaccgtc
aaggaatttacaagccgcgaccagttccggctgtataagctgatctgggaacgcttcgtg
tcgagccaaatggcttcggcactgctggatacgctgtccgttgacattgcggttggcaaa
gccatgttccgcgccgtcggttcaaaggtgtctttccccggctttatgaaggtctatgtg
gaaggcaacgatgacggtacgacggaggaagagaaatatttgccgcagcttcaggcgggc
gataagctggtcaagcaggaaatcgacccgaagcagcattttactcagcccccgccgcgt
tatacggaggcgcgtcttgtcaagacgcttgaggagctggggatcgggcgtccaagcact
tatgctccgacgctggaaacgatccagaagcgcggctatgtagccattgaagagaaaaaa
ttcatgcccaccgagctaggagaactggttatcgaacaaatggagcagttcttcccggaa
attctggatgtggaatttacggcgcatatggaaggcgatcttgaccatgtggaagaaggc
gcagaagattgggtaaaagttcttgccgaattttacaattccttcgagaagcgtcttgaa
gtggccgaagaggaaatgaaagagatcgagatcgtggatgaggtttccgacgagatttgc
gagaaatgcggaaagccgctcgtttacaagctggggcgtttcggcaaattcctggcctgt
tccggattccccgactgccgcaatacgaagccgattatcaaagacattggcgttggctgt
ccgaaatgccatgaaggaaaagtcgttgaacggcgcagtaagaagggacgcgttttttac
ggctgcgaccgttatcccgagtgcgattttgtctcttgggataaaccgtcttccaaaccg
tgtccggagtgcggtacctggatgatcgagaaacggaataagcaaggtgttcggctgcag
tgtacgtcatgcgatcataccgagaatctggaagacaatgaagaagaagctgcggaataa
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