Paenibacillus sp. URB8-2: PUR_33540
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Entry
PUR_33540 CDS
T10751
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
paub Paenibacillus sp. URB8-2
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paub03032
]
PUR_33540 (hupA)
03036 Chromosome and associated proteins [BR:
paub03036
]
PUR_33540 (hupA)
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_33540 (hupA)
DNA replication proteins [BR:
paub03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PUR_33540 (hupA)
Chromosome and associated proteins [BR:
paub03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PUR_33540 (hupA)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PUR_33540 (hupA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BCG59929
UniProt:
A0A810E046
LinkDB
All DBs
Position
complement(3658647..3658919)
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AA seq
90 aa
AA seq
DB search
MNKSDLINQVTEATELPKKDVTKAVDAVFEAITEALQGGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPSSKVPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctgatttgatcaatcaagtgacggaagcaactgaacttcccaagaaagat
gttaccaaagcggtagacgccgtattcgaggcgattacggaagctttgcagggtggtgac
aaggtacaactggtcggatttggcaacttcgaagtccgcgagcgttccgcacgtaaaggc
cgcaatccgcaaaccggtgaagaaatcgaaattccttcgagcaaagttccggcattcaaa
ccgggcaaagcgcttaaagacgggattaaataa
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