KEGG   Paenibacillus sp. URB8-2: PUR_33540
Entry
PUR_33540         CDS       T10751                                 
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
  KO
K03530  DNA-binding protein HU-beta
Organism
paub  Paenibacillus sp. URB8-2
Brite
KEGG Orthology (KO) [BR:paub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paub03032]
    PUR_33540 (hupA)
   03036 Chromosome and associated proteins [BR:paub03036]
    PUR_33540 (hupA)
   03400 DNA repair and recombination proteins [BR:paub03400]
    PUR_33540 (hupA)
DNA replication proteins [BR:paub03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PUR_33540 (hupA)
Chromosome and associated proteins [BR:paub03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PUR_33540 (hupA)
DNA repair and recombination proteins [BR:paub03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PUR_33540 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_euk_1 DUF2267
Other DBs
NCBI-ProteinID: BCG59929
UniProt: A0A810E046
LinkDB
Position
complement(3658647..3658919)
AA seq 90 aa
MNKSDLINQVTEATELPKKDVTKAVDAVFEAITEALQGGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPSSKVPAFKPGKALKDGIK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaatctgatttgatcaatcaagtgacggaagcaactgaacttcccaagaaagat
gttaccaaagcggtagacgccgtattcgaggcgattacggaagctttgcagggtggtgac
aaggtacaactggtcggatttggcaacttcgaagtccgcgagcgttccgcacgtaaaggc
cgcaatccgcaaaccggtgaagaaatcgaaattccttcgagcaaagttccggcattcaaa
ccgggcaaagcgcttaaagacgggattaaataa

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