Paenibacillus sp. URB8-2: PUR_34070
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Entry
PUR_34070 CDS
T10751
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub00300
Lysine biosynthesis
paub00470
D-Amino acid metabolism
paub01100
Metabolic pathways
paub01110
Biosynthesis of secondary metabolites
paub01120
Microbial metabolism in diverse environments
paub01230
Biosynthesis of amino acids
Module
paub_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PUR_34070 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PUR_34070 (lysA)
Enzymes [BR:
paub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PUR_34070 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BCG59982
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Position
complement(3711437..3712771)
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AA seq
444 aa
AA seq
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MFLHGTSRINDAGHLEIGGCDVTELKAEYGTPLYIVDEQLVRRRCREYMDAFAASGLGFQ
VAYASKAFSVMAMCRLADEEGLSLDVVSDGELYTALQAGFPAERIHFHGNNKTPDEIEMA
LEAGIGCFVVDNLVELELLQAIAADKNKTVSILLRVTPGVEAHAHHAYAATGQTDSKFGF
DIGNGSAQEAVGLASSKANLQLLGVHSHIGSQIFETEGFQLAVERVAGFARKVKEELGIE
FSVVNLGGGFGIRYVEGDTPLQVSEYVAAITDAVKTHFTGIGSALPEIWVEPGRSIIGDA
GTTLYTVGTSKEIPGVRKYVAVDGGMTDNPRPALYESKYEALLANRANEQPEETVAIAGK
CCESGDMLIWDLELPKAESGDLLAVACTGAYNYSMASNYNRIRRPAVVFVQNGQSDLVVK
RESHGDLIANDIVPARIAKQPVTK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacacgggacgagccggattaacgatgccggacatttggaaataggcggttgt
gacgtaacggaactcaaggctgagtatggaacaccgctgtatatagtggacgagcagctt
gttcgccgccgctgccgcgaatatatggatgcttttgcggcttccggtcttggatttcag
gtcgcttatgcgagcaaggctttttcggtaatggcgatgtgccgcctggccgatgaggaa
ggcctgtcgcttgatgtcgtatccgacggtgagctgtacaccgcactgcaggcgggtttc
ccggctgagcgcattcattttcacggcaacaacaaaaccccggatgagattgaaatggca
cttgaagcgggaatcggctgctttgtcgtcgacaatctggtagaacttgaactgctgcag
gccattgcggccgataagaataagacggtcagcatcctgctgcgcgtgacgcccggcgtt
gaagcgcatgcccatcacgcttacgccgccaccggccagaccgactcgaagttcggtttc
gacatcggcaacggctccgcacaagaagcggtaggcttggcctcgagtaaagccaatttg
cagcttctcggcgttcattcgcatatcggctcgcaaattttcgaaacggaaggcttccag
cttgcagttgagcgggtcgccggattcgcccgcaaggtgaaggaagagctgggcattgag
ttcagcgtcgtgaatctcggcggaggcttcggcatccgctacgtggaaggcgatacgccc
ctgcaagtatcggaatacgtcgcggcaattaccgatgcggtgaagacgcattttaccgga
atcggcagtgcgctgccggaaatctgggtggagccgggccgcagcattataggtgatgcc
ggcacgacgctctatacggttggcacgagcaaggagattccgggcgtacgcaaatatgtc
gccgtcgacggcggtatgaccgacaatccgcgcccggcgctgtacgagtccaagtacgag
gccctgcttgccaaccgggccaacgaacagccggaagagaccgtagcgattgcgggcaaa
tgctgcgaaagcggcgatatgctgatttgggatctggagcttccaaaggcggagagcggg
gatttgctcgcagtagcctgcacaggtgcctacaactactccatggccagcaactacaac
cgcatccgccgtccggccgtcgtattcgtgcagaacggccaaagcgatcttgtggttaag
cgcgaaagccatggcgatctgattgccaatgacatcgtgccggcgcgaatcgcgaaacag
ccggttacgaaataa
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