Paenibacillus sp. URB8-2: PUR_36640
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Entry
PUR_36640 CDS
T10751
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub00470
D-Amino acid metabolism
paub00550
Peptidoglycan biosynthesis
paub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PUR_36640 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PUR_36640 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paub01011
]
PUR_36640 (murD)
Enzymes [BR:
paub01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PUR_36640 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
paub01011
]
Precursor biosynthesis
Amino acid ligase
PUR_36640 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
2-Hacid_dh_C
TrkA_N
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
BCG60239
LinkDB
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Position
complement(3964433..3965854)
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AA seq
473 aa
AA seq
DB search
MKHPDKYRGEEVVVVGLAKSGVQVAKVLHERGAVVTVNDKKEREQCPEASELESLGISVI
CGGHPDGLIHEGVRLVVKNPGIPYSVPPVRKALELGIEVVTEVEVAYHLCAAPIIGITGS
NGKTTTTTWVGKMLEAAGMKPIVAGNIGTPLSQAAQEASPDNWMVVELSSFQLKGTEEFR
PKVGCLLNVAETHLDYHGDMSDYVASKAKLFANQGAGDTAVLNWDDSYCRELVPYIKGII
LPFSMTEELVQGVFVRPSYVPGTEDDLKRVIVYRDYTESDTVIAEVASIGLPGRFNVENA
LAACAIAIAAGADPAGLADALASFRGVEHRLEYVAGKGGAAYYNNSKATNSKATSMALAS
FRQPIVLIAGGLDRGSDYMELVQVLEGRVKAMVVLGQTKDKLAHVAKLAGLKTVITVDNE
DSAASVLQKAVREAAALAEEGDVVLLSPACASWDMFTSYEERGRIFKEAVHNL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatccggataagtaccgcggtgaagaggtcgtcgttgtagggcttgcgaagagc
ggcgttcaagtggccaaggtgctgcatgagcgcggcgccgtcgtcacggtgaacgacaaa
aaagagagagaacaatgtcccgaagcttccgaactggagtctttgggaatttctgttata
tgcggtgggcatccggacggactcattcacgaaggcgtgcggctcgtcgtgaagaatccc
ggcattccgtacagcgttccaccggtccgcaaagcgctggagctgggcatcgaggtggtg
acggaggttgaggtagcctatcatctgtgcgcggcgccgatcatcggcattaccgggtcc
aacggcaagacgaccacaacaacctgggtaggaaaaatgctggaagccgccggtatgaag
ccgatcgtggccggaaatatcggaactccgctcagccaggcggctcaggaagcttccccg
gacaactggatggtcgtggaactgagcagctttcagcttaaagggacggaagaattccgg
cccaaagtgggctgtctgctgaatgtggccgagactcatctcgactaccacggcgatatg
agcgattacgtggcttccaaagccaagctgtttgccaatcagggagcgggagacacggcc
gtgctgaactgggacgattcatactgcagagagcttgtgccttatatcaagggaattatt
ttgcccttttcgatgacggaagaactggtgcagggcgtgtttgttcgcccctcctacgtg
ccgggcaccgaggacgatctgaaacgggtcattgtctaccgcgactatacggagagcgat
acggtgatcgctgaagtggcctccatcggacttcccggccgctttaacgtggagaatgcg
ctggcggcctgcgccatcgcgattgccgccggggcggaccctgcaggactcgccgatgcg
ctggcttccttccgcggcgtggagcaccggctggaatatgtcgctggcaagggcggcgcg
gcgtattacaacaactccaaagcgaccaactccaaggcgacgtcgatggcgcttgcctcg
ttccgccagcctatcgtgctgatcgctggagggcttgaccgcggctccgattacatggag
ctggtccaggtccttgaagggcgcgtcaaagcgatggtggtcttggggcagacgaaggac
aagctcgcgcatgtcgcgaagctcgccgggttaaagacggttatcacggtcgataatgaa
gacagcgccgcctcggtgctgcaaaaggccgtgcgggaagccgccgctctcgccgaagag
ggggatgtggtgctgctgtcgcccgcctgcgccagttgggacatgttcacatcctatgaa
gagcgcgggcgtatttttaaagaggcggtgcataatctgtaa
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