Paenibacillus sp. URB8-2: PUR_37120
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Entry
PUR_37120 CDS
T10751
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PUR_37120 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_37120 (recO)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PUR_37120 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PUR_37120 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
ADD_DNMT3
Motif
Other DBs
NCBI-ProteinID:
BCG60287
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Position
complement(4020247..4020990)
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AA seq
247 aa
AA seq
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MEGIVIRSMDYGEGNAIITLCTENAGKVGVLVRGAKKVKSRHAALIQPFTLGQYVFFRNN
GGLGTLNSGEIMNSHHPIREDLIKAAYGSYACELLDRVLHDEETGSFWFRQLSACLDALE
EGKDPGVIINVFEMKILQAAGYGPQLDSCVACGREKPDNELLLSPRLGGALCRSCRHNDP
PAMEVSPRALKLLRLFAALDLTRLGNVDVKESTRAELKKNMRAFMDTQLGLRLKSQNFLD
QLDKYNI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtggaagggatcgtcatccgcagtatggactacggcgaggggaatgcaatcattacgctt
tgcaccgaaaacgcgggtaaggtaggtgttctcgtccggggagccaaaaaagtaaaaagc
cgccatgctgccctgatccagccgtttacgttagggcaatatgtttttttcaggaataac
ggagggctcggtacgctgaattccggcgagattatgaactcccatcatcccatcagggaa
gatctgattaaagccgcctacggctcatatgcctgcgagctgctggaccgggtgctgcat
gatgaggagacggggagcttctggttccggcagctgtcagcctgcttggacgcgctggaa
gaggggaaggacccgggagttattatcaatgtattcgagatgaaaatactccaggcggcc
ggctacggtccgcagcttgattcctgtgtcgcctgtggtcgggagaagccggacaatgag
ttgctgctcagtccccggctgggcggcgctttgtgccgaagctgccgccacaatgatccg
ccggcaatggaggtttcgccccgcgcattaaagctcctccgtctgttcgctgccctggat
ctcacccgtctgggcaatgtcgacgtcaaggagagtacacgggcagagttgaaaaaaaac
atgcgggcgttcatggatacccagttgggtcttcggctgaagtcgcagaattttctggat
cagctcgataaatacaatatttga
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