Paenibacillus sp. URB8-2: PUR_38800
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Entry
PUR_38800 CDS
T10751
Symbol
uvrD_2
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub03420
Nucleotide excision repair
paub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PUR_38800 (uvrD_2)
03430 Mismatch repair
PUR_38800 (uvrD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_38800 (uvrD_2)
Enzymes [BR:
paub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUR_38800 (uvrD_2)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PUR_38800 (uvrD_2)
MMR (mismatch excision repair)
Other MMR factors
PUR_38800 (uvrD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
DEAD
AAA_30
Viral_helicase1
SLFN-g3_helicase
PhoH
ResIII
NACHT
AAA_11
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BCG60455
UniProt:
A0A810E188
LinkDB
All DBs
Position
complement(4210239..4212428)
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AA seq
729 aa
AA seq
DB search
MEDNFQSAYQEEHERLTTALAEIDRQLTTLTNTPVYTGNDYTEQILEASREQRRGSLGKL
RQEPYFGRLDFEESGDGERKALYIGKIGVDREQVSDRPLVIDWRAPVASLFYSFTGGMEP
ASYESPEGIVEGLVYLKRNVVIRKRILERVADTFDRESDGPAVSDEFLVYRLGENKDNRL
RDIVSTIQEEQDRIIRAAKNTALIIQGVAGSGKTTVALHRLAFLLYQYKEQVAAERMIIF
APNRMFLDYISDVLPELGVGNIQQSTFADWAGDMLGLELPQNDAMETLNRWFEAPGGMPE
ITEQTPGRFKGSTVLMGIIEDAVRRLETSSVPEGDFSPWEGAVLPRRMILKWHNEEYAPY
PPAKRKERVMARIHRWIEMELKKSPSAAALKDRKKKGAQREKAYGAKWPKYDPLTIYKQI
FRAVKTPADWPSEDPEAIPAAVLKETRGQLKKGMVLEEDLPPLLYIHYLLNGDEGVQKFD
HVVIDEAQDFSPFQIAVLDLYVRGHSFTILGDLSQGIHAYKGVHDWNEMQSLFAPEHTSY
HALTRSYRSTMEIIDFANGILSAGVRSDLLAVPVFRSGSPVRLIQYGESREGDIRSALAD
LSGRDFRTVAILTRTLADAAHLYEVLSAHFDDIHLIDGGIAEYQGGLSVLPLYLSKGLEF
DAAIVADADLESYGETAWDAKLLYVGCTRALHELWLLHNGRMPDYLREAANGGETAKGWP
EAPSAAKTE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttggaggacaactttcaaagtgcctatcaagaggagcacgaaaggctgaccacagcgctt
gcggaaattgaccggcagctgacaacgctgacaaacacaccggtgtacacgggcaacgat
tacacggaacagattctggaggcatcgagggagcaaagacgcggcagtctgggcaagctg
cgacaggagccttacttcggacggctggacttcgaggagagcggcgacggggaacgcaag
gcgctttatatcggcaaaatcggcgtggaccgcgaacaggttagcgaccgcccgctcgtc
atcgattggcgcgcaccggtggcgagcctgttctattcgtttaccgggggcatggagccg
gcttcttacgaatcgccggagggtattgtcgaagggcttgtgtatctcaagcgcaacgtg
gtgatccgcaagcggattttggaacgggttgcggacacctttgaccgcgagagcgacggt
ccggcggtgtcggatgaatttctggtctaccgtctgggagagaacaaggataaccggctg
agagatatcgtatcgactatccaggaagagcaggaccgcattatccgggcggcaaaaaac
acggcgctcatcatccagggcgttgccggtagcggaaaaacgacagtggcgctgcaccgg
ctcgcctttttactgtatcagtacaaggagcaggtggcggcggagcggatgattattttt
gccccgaaccggatgtttctggactatatttccgatgtattgcccgagcttggcgtcggc
aacattcagcagagcacctttgccgactgggcgggggatatgctgggtttggagctgccg
caaaatgacgccatggagacgctgaaccgctggttcgaggcgccaggcgggatgcccgaa
atcacggaacagacacccggacgtttcaaggggtcgacggtactgatgggaatcatcgaa
gacgcggtgcggcggctggaaacaagctctgtcccggaaggggatttctctccgtgggag
ggggcggttctgccccgcagaatgattctcaagtggcataatgaagaatacgccccttat
ccgcctgccaagcgaaaggaacgggtcatggcccggattcaccgctggatcgagatggag
ctgaagaagagcccttcagcagcggcgctgaaagaccggaagaagaaaggggcgcagcgc
gagaaggcctatggcgccaaatggcccaaatacgatccgttgacgatctacaagcaaatc
ttccgcgctgtgaagacgcctgcggattggcctagcgaagacccagaggccattccggcg
gccgtgctgaaggagacgcgcggtcagctcaagaaggggatggtgctggaggaggattta
ccgccgctgctgtatattcattacctgctcaacggggatgaaggcgtgcagaagttcgac
catgtcgtcatcgacgaggcgcaggatttctcgccgtttcagatagcggtgctcgatctg
tatgtgcgcggacattcctttacaattctcggcgatttatcgcaggggattcatgcctac
aaaggggtgcatgactggaacgaaatgcagtccctgttcgcgccggagcatacatcgtac
cacgcgctgacgcgaagctaccggtccacgatggaaataatcgattttgccaacgggatt
ctgtcggcgggcgttcgcagcgacctgcttgccgtccctgtattccgcagcggcagcccc
gttcggctgattcaatacggtgagagccgggaaggcgacatccggtcggcgcttgcggac
ctgtctggaagagatttccgcaccgtggcgatcctgacccggacgttggcggacgcagcg
catctctacgaagttttgtcggcgcattttgacgatatccatctgatcgacggcggaatc
gcggaataccagggagggctctcggtgcttccgctctatttgtccaagggactggagttc
gatgctgccattgtggccgacgccgatctggaatcttatggcgaaacggcatgggacgcg
aagctcctctatgtcggctgcacccgggcgctgcacgagctgtggctgctccataacggc
agaatgccggactatttgcgcgaagcggcgaacggcggggagacggctaaagggtggccc
gaagccccttctgcggcgaagacggaatag
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