Paenibacillus sp. URB8-2: PUR_39550
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Entry
PUR_39550 CDS
T10751
Symbol
rluD
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
paub Paenibacillus sp. URB8-2
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paub03009
]
PUR_39550 (rluD)
Enzymes [BR:
paub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PUR_39550 (rluD)
Ribosome biogenesis [BR:
paub03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PUR_39550 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BCG60530
LinkDB
All DBs
Position
complement(4293587..4294531)
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AA seq
314 aa
AA seq
DB search
MRPGESAKKPGWARRGEWLETMPGRSVTSAEDKGEAIDRWLKETVGMPDKLLSRLRREDG
IQWRGDRLRLALFPPREPGIEPVWHELEVLHEDDFCLVVHKPAGMAVHPDGSGNGVTLDH
AVAAHYAASCENCAVRHIHRLDRETTGPVLYAKNEFAQAILDEAMRDKVISRRYAAIVKG
EVPKSLTVIDQPIGRDRHHAGRRRVSPGGQAAVTRIVGREVWQGASLLHIELETGRTHQI
RVHLSHVGHPLYGDALYGGPKAPEVQGNRPLNRQALHGEALRFAHPWSGEELDIVDPWPD
DMLLLRNVLGGGIG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgaggccgggagaatccgccaagaagcccggttgggcgcggcgcggggaatggctggag
acgatgcccggccgcagtgtgacctccgccgaggacaaaggcgaggccattgaccggtgg
ctgaaggagacggtcggaatgccggacaagctgctgtcccggcttcgccgcgaggacggc
atccagtggagaggggaccggctgcggctggccctttttccgcccagggaaccggggatt
gaaccggtctggcatgagcttgaagtgctgcacgaggacgacttctgcctcgtcgttcac
aagcctgccgggatggcggtgcatcccgacggaagcgggaacggcgtgacgctggatcat
gcggtcgccgcccattacgccgcctcctgcgagaattgcgccgtccggcatattcaccgt
ttggacagggagacgaccggaccggtgctgtacgcgaagaatgaatttgcgcaggcgatt
ctggatgaggcgatgcgggacaaggtgatttcccgccggtatgccgccatagtcaaggga
gaggtgccgaaatcgctgactgtgatcgatcagccgattggacgcgaccgccatcatgcc
ggacgacggagggtatcccccggcggtcaggcggcggtgacccggattgtcggccgcgag
gtgtggcagggagcatctctgctgcatatcgagctggagacgggccggacgcaccagatc
cgggtgcatttaagccatgtgggccatcccctatacggagacgcactgtacggcgggccg
aaggcgccggaagttcaggggaaccgtccgctgaaccggcaggcgctgcacggggaagcc
ctgcgctttgcgcatccatggagcggggaagagcttgacattgtcgatccctggccggac
gatatgctgctgctgcggaacgttcttggcggcggcatcgggtaa
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