Paenibacillus sp. URB8-2: PUR_50700
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Entry
PUR_50700 CDS
T10751
Symbol
uvrD_3
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paub Paenibacillus sp. URB8-2
Pathway
paub03420
Nucleotide excision repair
paub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PUR_50700 (uvrD_3)
03430 Mismatch repair
PUR_50700 (uvrD_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paub03400
]
PUR_50700 (uvrD_3)
Enzymes [BR:
paub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUR_50700 (uvrD_3)
DNA repair and recombination proteins [BR:
paub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PUR_50700 (uvrD_3)
MMR (mismatch excision repair)
Other MMR factors
PUR_50700 (uvrD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
SLFN-g3_helicase
DEAD
PhoH
NACHT
nSTAND3
AAA_16
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCG61645
UniProt:
A0A810E4Q4
LinkDB
All DBs
Position
complement(5515588..5518005)
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AA seq
805 aa
AA seq
DB search
MISAGDWKQEQERLNLVTEKLQARIAELEPEVAGLHDQAVDIRKQFWEEVTVNTSTDEDF
EETFYSIRQQEALLSERERSHRQRMQQWKNMKRLLSSPYFGRIDFHEDGLSSTEQVYIGV
SSFVDSDGMNFLVYDWRTPIASMYYDYSPGAAGYDTPDGAISGTMKLKRQYQIRESVLQN
VFDTGVTIGDELLQQVLGKGTDNQMKSIVATIQKEQNAIIRDDKNRMLIVQGAAGSGKTS
AALQRVAYLLYKHRERLKADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLDHWL
GGTFRVEDPFDQIEYVLTEASSQGYEARMKGMEYKASADFLQALQNYAQWLEQQGMRFTS
IRFRDRDLITAKQMESTFYSYDPSIRMTNRIIMLQDWLLRELNLLESKEREALWVQEELD
YLDKDQYAEAYHALHKERGVFDFAEQYEEVRERLDGKGRPDEGDFDYAEREEELLRRMIV
KEQFKPLKRSVNRLLFIDMAQLYIQLFEEEDAFKKMTKEAEMPSLWPEICEQTKEKLGRH
ELFYEDATPYLYLKELIEGVRTNTEIRHIFVDEGQDYSMFQYEFLKKMFPRARMTVLGDF
GQAIFAQATELYGEESPLIRLYGESDTSLFRLVRSYRSTREIVEFTKSLLPNAKEIVPFE
RSGRKPLLSKAGDGEKRAARIGEHLAALQAEGFASIGVITKTAAESNEAYDLLTSQGCQG
LKLVTKSTPTFEKGTLVIPVYLAKGVEFNAVLIFDASSQTYHRESERKLFYTACTRAMHR
LLLYAAGEWTPFIQALDESLYEVET
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgataagcgcgggggattggaagcaagagcaggagcggctgaatctggttacggaaaag
ctccaagcgagaatcgccgaactggagccggaggtagccgggctgcatgatcaggcggtg
gatatccgcaagcaattctgggaggaagtaacggtcaacacaagcactgacgaagatttt
gaagagaccttctacagtatcaggcagcaagaagcgttattgtccgaacgggagcggagc
caccggcagcgcatgcagcagtggaaaaatatgaagcggctgctgtcatcgccctacttt
gggcgtatcgatttccatgaggatggcttgagctccaccgagcaagtctacatcggcgtg
tcatccttcgttgattcagacggcatgaattttctggtatatgactggcgtacaccgatc
gcgagcatgtactacgattattctccgggagcggccggatatgacacgccggatggagcc
atctcggggacgatgaagctgaaacgacagtatcagatccgcgagtcagtgctgcagaac
gtgttcgacacgggcgtaacgatcggcgacgaattgctgcagcaggtgctcggcaagggt
acggacaatcagatgaagagcatcgtcgcgacgatccaaaaggagcaaaacgccattatc
cgcgatgacaaaaaccggatgctcatcgtgcagggggcggccggcagcgggaaaacctcg
gcggcgctgcagcgggtagcgtatctgctgtataagcaccgcgagcggctcaaggcggac
caaatcgttcttttttccccgaatccgatgtttaacagctatgtatctaccgttcttccc
gagctcggtgaagaaaacatgcagcagacgaccttccaggaatatctggaccactggctt
ggcgggacgttccgtgtagaggacccctttgaccagatcgaatacgtgctgactgaagca
tcaagccaaggatatgaggcccggatgaaaggcatggagtacaaggcatccgcagacttt
ctgcaagctctccagaattatgcgcagtggctggagcagcagggcatgcgcttcacaagc
atccgctttcgggaccgcgatttgatcacggccaagcaaatggaatccacattttacagc
tatgatccctccattcgcatgaccaatcgcattattatgctgcaggattggctgctgcgt
gagttgaacctgctggaaagcaaggagcgtgaggcgctttgggttcaggaggagctcgat
tatcttgacaaggatcagtatgccgaagcgtatcatgctctgcacaaggagaggggcgtg
tttgactttgccgagcagtatgaagaggtccgcgaaaggctggacggcaagggcagaccg
gacgagggcgatttcgactatgccgagcgggaggaagagctgctgcgccggatgatcgtg
aaggagcagtttaagccgctgaagcgaagcgtgaatcggttgttgttcatcgatatggct
cagctgtacattcaattgtttgaagaagaggatgcttttaaaaagatgacgaaggaagct
gaaatgccctcgctttggccggaaatctgtgagcagaccaaggagaagcttggccggcat
gagcttttctatgaagatgcgacgccgtacctgtatttaaaagagctcatcgagggcgtt
cggacgaacacggagatccggcatatattcgtcgatgagggtcaggattattcgatgttt
caatacgagttcctcaaaaaaatgttcccccgagcccgcatgacggtgcttggcgatttc
ggtcaggccatctttgctcaggccacggagctgtacggtgaagaatctccgctcatccgg
ctgtacggcgaatcggacacgagcttgttccgcctggttcgcagttaccggtcaacccgt
gagattgtggaattcacgaagtctctgctgccgaacgccaaggagatcgtaccctttgaa
cgaagcggcagaaaaccgctcctctctaaggcgggcgacggcgagaagcgcgcagcgcga
ataggggagcatctcgcggcgcttcaagcggaaggcttcgcctccatcggcgtcattacg
aagacagcggccgaaagcaacgaagcttatgatctattgacgtctcagggatgccagggg
ctgaagcttgtgacgaagagcacgcccaccttcgagaagggaacattggtgatccccgta
tatctcgccaagggggttgaattcaacgccgttctcatctttgacgcctcttcgcagacg
tatcatcgggagagcgagcgcaagctattttataccgcgtgtacgcgtgccatgcatcgg
cttctgctgtacgcagcaggagagtggaccccgttcattcaggcattggatgagtccttg
tatgaggtggagacgtaa
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