Parerythrobacter aurantius: WAB17_00070
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Entry
WAB17_00070 CDS
T11164
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
paui Parerythrobacter aurantius
Brite
KEGG Orthology (KO) [BR:
paui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paui03016
]
WAB17_00070 (truB)
Enzymes [BR:
paui01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WAB17_00070 (truB)
Transfer RNA biogenesis [BR:
paui03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WAB17_00070 (truB)
Prokaryotic type
WAB17_00070 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WXK59760
LinkDB
All DBs
Position
complement(12761..13852)
Genome browser
AA seq
363 aa
AA seq
DB search
MTDKKPQPHGWLILDKPRGMGSTQAVGAVKRNLREAGYGPKSKDMPKVGHGGTLDPEAEG
VLPIALGEATKLAGRMLDASKIYEFTVQFGEETDTLDAEGAVIATSNHRPPMAAVAAVLE
HFTGDIEQFPPAYSALKVDGKRAYDLARAGEQVKLKSRAVTVYDLYFSLRPEPVEGLSIS
SGAGLEKEDRASTSSARTDVGLRSSFQTTAGRPDPFDPAAPLELADAVTLTAHVSKGTYI
RSLARDIAHALGTVGHVTYLRRIKAGPFREDQAISLDNLNEIGKGAPLQDLLLPLEAGLD
DIPALQLDPDSAQAVRQGRVISDMPQADGLYLAKLESVPVALVELGGGTMKVVRGFNLPD
VAE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagaaaccccaaccccacggatggctgatcctcgacaaaccgcgcggcatg
ggctcgacccaggcggtcggggcggtgaagcgcaacctgcgcgaggccgggtatggcccc
aaatccaaggacatgcccaaggtcggccatgggggcacgctcgatcccgaggcggagggc
gtactgcccattgcattgggcgaagcaaccaagctcgccgggcggatgctcgatgcgagc
aagatctacgagttcacggtccagttcggcgaggagaccgacacgctcgatgccgaaggc
gcagtgatcgcgacctcgaaccatcgcccgccgatggcggcggtggcggcggtgctggaa
cactttaccggcgatatcgagcagtttccgcccgcctattcggcgctcaaggtcgacggc
aagcgcgcctatgacctggcgcgggcaggggaacaggtcaaactcaagtcccgcgcggtg
acggtttacgacctgtacttctcccttcgccctgagcctgtcgaagggctgtccatttct
tctggcgctggtctggaaaaggaggacagggcttcgacaagctcagcccgaacggacgtg
gggttgagatcgtcgtttcaaactaccgccggtcgaccggaccctttcgaccctgctgcg
ccgctcgaactggccgacgccgtcaccctgaccgcccacgtctccaagggcacctacatc
cgcagcctcgcccgcgatatcgcccatgcccttggaaccgtgggccacgtgacctatctc
aggcgcatcaaggccggcccgttccgcgaggatcaggcgatttcgctggacaatctgaac
gaaatcggtaagggcgcgccacttcaagacctcctcctgccgctcgaggcggggctggac
gacatcccggctctgcaactcgatcccgatagcgcgcaggcggtccgacagggccgggtc
atttcggacatgccccaagccgacgggctctaccttgcgaagctggaaagcgttccggtt
gcgctcgtggaactcggcggcggcacgatgaaagtcgtgcgggggttcaaccttcccgat
gtcgcggagtaa
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