KEGG   Parerythrobacter aurantius: WAB17_06820
Entry
WAB17_06820       CDS       T11164                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
paui  Parerythrobacter aurantius
Brite
KEGG Orthology (KO) [BR:paui00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paui03400]
    WAB17_06820
Enzymes [BR:paui01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WAB17_06820
    5.6.2.6  RNA 3'-5' helicase
     WAB17_06820
DNA repair and recombination proteins [BR:paui03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    WAB17_06820
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WXK61022
LinkDB
Position
1379390..1381834
AA seq 814 aa
MIDAVPPEIDAWFAGRGWRVRRHQAEMLAASDSGRHALLVADTGAGKTLGGFLPTLAEFC
PSRLAGSAPPDGLHTLYVSPLKALAHDVQRNLLTPVEEMGLPIRIETRSGDTPSDRKRRQ
REKPPHVLLTTPESLSLLLSYPDSFELFAGLRRIVIDEVHAFATGKRGDLLALSLARLQA
IAPSLQRVALSATLANPEGFREWLAPWGEIDTVVLVEGEAGAPAEVEILLPEEERVPWGG
HAGTWAVPQVYETIRQNRTTLVFTNTRFLAEFLFQQLWDINDDLLPIGVHHGSLSKEARR
KVEGAMARGELRALVATASLDLGVDWGDIDCVVQMGAPKGSSRLLQRIGRANHRLDQPSR
ALLVPGNRFEFLEAQAAKDAVDEGQRDGEEFRPGGLDVLAQHVMACACAAPFAEAELLGE
IRSSLSYAWVDETVWERVLNFVATGGYALKAYDKFRRIVRDRAGVWRLAHPEMAAKHRLN
AGIIIDSEMLEVRFRNGRSLGKVEERFAASLRPGDTFAFAGQALEVEQLRDMEIVVRATA
KSAMIPSYGGARMPLTTHLADRVRAMLVDRAGWARFPDDVREWLEVQDWRSRMPGPDKLL
VESFPHAKKHYTVYYTFTGWNANQSLGMLITQRMEVQGLMPGGFVANDYSLAVWGLRPVT
DPAPLLSPDILAHEFVEWVQESYLLKRAFREVAVIGGLVERQQPGKRKSGRQVTFSTDLI
YDVLRKYEPDHVLLEAAWADARERLTDIGRLQDLLERSADQLEHVVLDRVSPLAVPVMVM
IGRESMPQGSVDDELLLEAESLASAAMRLDSLPG
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgatcgacgccgttccgccggaaatcgatgcctggttcgccggtcgcggctggcgcgtg
cggcggcaccaggcggaaatgctcgcggcttccgacagcgggcggcacgcgctgctggtg
gcggataccggcgccggcaagaccctcggtggcttcctcccgacgctggccgagttctgc
ccttcgcggttggcggggagtgctccgcccgatgggctccacacgctctacgtgtcgccg
ctgaaggcgctggcgcatgatgtgcagcgcaatctcctcacccccgtcgaggaaatgggc
ctgccgatccggatcgagacccgcagcggcgatacaccgtcggaccgtaagcggcgccag
cgtgaaaagccgccgcatgtcttgctgacgacaccggaaagcctgtcgttgctgctgagt
taccccgacagtttcgaactcttcgcggggctccggcggatcgtgatcgacgaggtgcac
gcctttgccaccggcaagcgcggcgacctgctggcgctcagcctggctcgcctgcaggcg
attgcgccctcgctccagcgtgtcgccctgtcggcgacgctggccaatcccgagggcttt
cgcgaatggctggcgccgtggggggaaatcgacaccgtcgtactggtagaaggcgaggcc
ggcgctccggccgaggtcgagatcctgctgccagaggaggagcgtgttccctggggcgga
catgcgggtacctgggccgtgccgcaagtctacgaaacaatccgccagaaccggacgacg
ctggtgttcaccaacacccgcttccttgcggagttcctgttccagcaactgtgggacatc
aacgacgacctgctgccgatcggcgtccatcacggctcgctcagcaaggaggcgcggcgc
aaggtcgaaggggcgatggcgcggggcgaactgcgcgcattggtggcgacggccagcctc
gacctcggcgttgactggggagatatcgactgcgtggtccagatgggggcgccaaaggga
tcgtcccgcctgctccagcggatcgggcgcgccaatcatcggctcgaccagccgagcagg
gccctgctggtccccggtaaccgcttcgagttcctcgaggcgcaggcggccaaggatgcg
gtcgacgaaggccagcgcgacggggaggagttccgccccggcgggctcgacgttctggcc
cagcacgtcatggcctgcgcctgcgccgcgccctttgcggaagccgaactgctaggggaa
atccgctcctcgctatcctatgcctgggtcgacgagaccgtttgggagcgcgtgctgaac
ttcgttgccaccggcggctacgcgctgaaagcctacgacaaatttcgccggatcgtgcgc
gacagggcaggcgtctggcggctcgcccatccggaaatggcggcgaaacaccggctcaat
gcgggcatcatcatcgattccgaaatgctcgaagtgcggtttcgcaatggccgctcgctg
gggaaggtagaagaacggtttgccgcatccttgcgccccggcgacaccttcgctttcgcg
gggcaggcgctggaggtcgaacagcttcgagacatggagatcgtcgtccgggcgactgcg
aagtcggcgatgatcccgagctatggcggcgcgcgcatgccgctgacgacccatcttgcc
gaccgggtgcgcgcgatgctggtcgaccgggcgggctgggctcggtttcccgacgatgtg
cgcgaatggctggaagtgcaggactggcgcagcaggatgcctggcccggacaagttgctg
gtcgagagcttcccccatgcgaagaagcattacacggtctattacaccttcaccggctgg
aacgcgaaccagtccctcggcatgctcatcacccagcggatggaggtgcaggggttgatg
ccgggcgggttcgtggccaacgactattcgttggcggtctggggcctccgcccggtgacc
gatccggcgccgctgctatcgccggatatcctcgcgcatgaattcgtcgagtgggttcag
gaaagctacctgctaaaacgggcgttccgggaagtggcggtaatcggcgggctggtcgag
cgccagcagccgggcaagcgcaagagcgggcggcaggtcaccttctcgaccgacctcatc
tacgatgtgctccgcaagtacgagcccgaccacgttctgctcgaagcggcctgggccgat
gcgcgcgagcggctgacggacatcgggcggttgcaggacctgctcgaacgctccgccgac
cagctcgagcacgttgtgctggaccgcgtcagccccttggcggtgcccgtcatggtcatg
atcggccgcgaaagcatgccgcaagggtcggtcgacgacgaactgttgctggaagccgaa
agcctggccagtgcggcgatgcggctggatagcttgcccggctga

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