Parerythrobacter aurantius: WAB17_07120
Help
Entry
WAB17_07120 CDS
T11164
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
paui Parerythrobacter aurantius
Pathway
paui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WAB17_07120 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paui03019
]
WAB17_07120 (recQ)
03400 DNA repair and recombination proteins [BR:
paui03400
]
WAB17_07120 (recQ)
Enzymes [BR:
paui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WAB17_07120 (recQ)
Messenger RNA biogenesis [BR:
paui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WAB17_07120 (recQ)
DNA repair and recombination proteins [BR:
paui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WAB17_07120 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
AAA_30
ResIII
PT-TG
Motif
Other DBs
NCBI-ProteinID:
WXK61120
LinkDB
All DBs
Position
1441180..1442973
Genome browser
AA seq
597 aa
AA seq
DB search
MNSPLPIDVPEQARARLRALFGYDDFRGRQLEVIERVLAGQSTLGVMPTGAGKSLTYQLP
ATMLQGTCVVISPLIALMHDQLRAARANGIRAATLTSVDADWRETMDAFRSGELDLLYVA
PERASQGSFCDLLTAAPVSLFAIDEAHCVSEWGHDFRPDYRQLRPLMDQFGDVPRLALTA
TADRHTRADILEQLGIPQDGMIVAGFDRPNIRYAIRHRDNPVRQLVTLMREQPGPGIVYA
PTRRKVEELAEKLAAATGREVLPYHAGLEPQQRADHQARFVASEDMVMVATIAFGMGIDK
PDVRFVAHAGIPKSIEAYYQETGRAGRDGDASLALMLWGAEDFARARMRLSEAPEDRREG
DRQRLDSLSTLVETAGCRRAVLLRHFGEDPPQGCGNCDNCLEAPGVIDATELAQKLLSAV
YRTGQSFGFGHIQKVLTGDEDDRVRQRGHDGLSVFGIVGSEEAPMLRAVSRALQARGSLV
ATEHGGLALGGDAKNILKGEQAVMIVKPPKPARGGRKSRDGGANPVGDPLFDALRELRRE
LAVEAGLPPYVIFHDATLREMAQARPATLDELGRVGGVGAKKLDAYGSRFLDCIRRH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccccctgccaatcgatgtgccggaacaggcgcgcgcacggctgcgcgccctg
ttcggttacgacgatttccgcggtcgccagctcgaagtgatcgagcgcgtccttgccggg
cagtcgacgctgggggtgatgccgaccggtgccggcaagtcgctgacctaccagcttcca
gcgaccatgctgcagggcacctgcgtggtcatctcgccgctgattgcgctgatgcacgac
cagctgcgcgctgcgcgtgccaacggcattcgcgcggcgacactgaccagcgtcgatgcc
gactggcgcgagaccatggacgcattccgcagcggcgagctcgacctgctctatgtggcg
cccgaacgcgccagccagggttcgttctgcgacctgctgacggccgcgccggtcagcctg
ttcgccatcgacgaggcccattgcgtgtccgaatgggggcacgacttccgtcccgactat
cgccagctgcgcccgctgatggaccagttcggcgatgtcccaagactggcgctgacggcg
acggccgacaggcacacacgggccgacatcctcgagcagctcggcatcccgcaggacggc
atgatcgtggccggattcgaccggcccaacatccgctatgccatccgccatcgcgacaat
ccggtccggcagcttgtcaccctgatgcgcgagcagccgggaccggggatcgtctatgcg
ccgacccggcgcaaggtcgaggaactggcggagaagctcgccgccgcaacggggcgcgaa
gtgctgccctatcatgccgggctcgaaccgcagcagcgcgccgatcaccaggcgcgcttc
gtcgccagcgaggacatggtgatggttgcgaccatcgccttcgggatggggatcgacaag
cccgacgtgcgcttcgtcgcccatgccggcatccccaagtcgatcgaggcctattaccag
gaaaccggccgcgccgggcgcgacggcgatgcgtcgctggcactgatgctgtggggtgcg
gaggacttcgcccgcgcgcgaatgcggctgtcggaggcgcccgaggaccgccgcgagggc
gaccgccagcggctcgattcgctcagcacgctggtcgagacggcggggtgtcgccgcgcg
gtgctgctgcgccacttcggcgaggacccgccgcagggctgcggcaattgcgacaattgc
ctcgaagcgcccggcgtcatcgacgcgaccgaactggcgcagaagctcctctcggcagtc
tatcgcacgggacagagcttcggtttcgggcatatccagaaagtcctgaccggcgacgaa
gacgaccgggtgcgccaacgcggtcacgatggcttgagtgtgttcggtatcgtcgggagt
gaagaagcaccgatgctgcgggctgtcagccgcgcgttgcaggcacgcggctcgctggtg
gcgaccgagcatggcggactggcgctgggcggcgatgccaaaaatatcctcaagggcgag
caggcggtgatgatcgtcaagccgcccaagcctgcacgcggtggccgcaagtcacgggac
ggcggcgcaaacccggtgggcgacccgctgttcgatgcgctgcgcgagttgcggcgcgag
ctggcggtcgaggcagggctgccgccctatgtcatcttccatgacgcgaccctgcgcgag
atggcgcaggcgaggccggcgacgctggacgaactgggccgggtcggcggggtgggggcg
aagaagcttgatgcctacggcagcaggttcctcgattgtatccgtcgccattga
DBGET
integrated database retrieval system
