Parerythrobacter aurantius: WAB17_09840
Help
Entry
WAB17_09840 CDS
T11164
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paui Parerythrobacter aurantius
Brite
KEGG Orthology (KO) [BR:
paui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paui03032
]
WAB17_09840
03400 DNA repair and recombination proteins [BR:
paui03400
]
WAB17_09840
Enzymes [BR:
paui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WAB17_09840
DNA replication proteins [BR:
paui03032
]
Prokaryotic type
DNA Topoisomerases
WAB17_09840
DNA repair and recombination proteins [BR:
paui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WAB17_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WXK58926
LinkDB
All DBs
Position
1976727..1977740
Genome browser
AA seq
337 aa
AA seq
DB search
MATQPSHLIYVDDSLPGITRKRAGKGWSYYDPKGKLIADRAERARLNAIALPPAYRDAWF
CPADNGHILATGYDDKRRKQYRYHPDFRNARESEKFDGCLAFGNLLPLVRKRVEEDLAER
KLTRERAIASVVRLLDLGAVRVGNEGYAQANESFGATTLRQRHAEVTGHTLRLRYKGKAG
KLQEVTVTDASLARVVRRMQDLPGQHVFQYLDAAGELQAVGSSDVNEYLRETMGEDFTAK
NFRTWHASVMGLTCLHEAEDKVPLKYMLECVSQKLGNTPAIARKSYIHPAVIALVEDQAN
WRENTTLPRATRWLTREERALLDLLEEAPAAQELLAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcaaccctcgcacctcatctatgtcgacgacagccttccgggcataacccgc
aagcgcgcgggcaagggctggtcctattacgatccgaagggcaagctcattgctgatcgg
gccgagcgggcccggctcaacgccatcgccctgccgccggcctatcgcgatgcgtggttc
tgcccggcggacaacggccatatccttgccaccggttatgacgacaagaggcgcaagcag
taccgctatcaccccgatttccgcaacgcgcgcgaaagcgagaagttcgacggctgcctc
gccttcggcaatctgttgccgctggttcgcaagcgggtcgaggaggacctcgccgaacgc
aagctgacgcgcgaacgcgccattgccagcgtggtacgcctgctggatctgggcgcggtg
cgcgtcggcaacgaaggctatgcgcaggcgaacgagagcttcggtgcgaccacgctgcgc
cagcgccatgccgaggtcacggggcacacgctgcgcctgcgctacaagggcaaggcgggc
aagctgcaggaagtgacggtgaccgatgccagcctcgcccgggtggtacggcggatgcag
gacctgcccggacagcacgtgttccagtatctcgatgccgcgggcgaattgcaggcggtc
ggatcgagcgacgtcaacgagtacctccgcgagacgatgggcgaggatttcactgccaag
aatttccgcacttggcatgcgagcgtcatgggactgacctgcctgcatgaggcggaggac
aaggtgccgctgaaatacatgctggaatgcgtctcgcagaagctcggcaacacgccggcg
attgcgcgcaaaagctatatccaccccgccgtgattgccctggtcgaggatcaggcaaac
tggcgggaaaacaccactctgccgcgcgccacccgctggctgacgcgcgaggaacgtgcg
ctgctggacttgctggaggaggccccggcggcgcaagaactgcttgcagcctag
DBGET
integrated database retrieval system
