Paenibacillus aurantius: MJA45_03865
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Entry
MJA45_03865 CDS
T09594
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
paun
Paenibacillus aurantius
Brite
KEGG Orthology (KO) [BR:
paun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paun03009
]
MJA45_03865 (rlmD)
Enzymes [BR:
paun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MJA45_03865 (rlmD)
Ribosome biogenesis [BR:
paun03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MJA45_03865 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_11
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
RrnaAD
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
WNQ12198
UniProt:
A0AA96LFQ1
LinkDB
All DBs
Position
767448..769133
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AA seq
561 aa
AA seq
DB search
MNRQKRPAPRGEGRKPAGARRSGEAGGSRAYEAGLPVKKNEDYEADIIGLGHDGEGVGRV
NGFTLFIHGALPGERVRVKVVKLKKQYGYGKLLEVLEASPDRSAPPCPIYSQCGGCQLQH
LSYEAQLKWKRQSVIDSLERIGKLVVCCSGRGADVLVGEADLVGGSEDAEAGGEEDRAGK
TAGKTDGEAAGPRAREHSVSVEVTGAGVNGDPSERGIVVHPTIGMDEPWRYRNKAQVPFG
WAEGGLVGGFYAQGSHRIVDMDSCLIQHEANDDVVRKVKEIGRKLGITAYDEASHEGLLR
HVVVKFGFRTGDVMVVLVTNGNKVPHLDEWVREIREAVPGVKSICHNVNTKRTNVIFGDS
TTVLWGDEFIYDYIGDVKFAISARSFYQVNPVQTEVLYRTALDYAALTGSENVIDAYCGI
GTISLFLARHAKQVRGVEIVAEAIADARRNAALNGIANVDFAVGKAEEVIPAWRAEEGLA
PDIIVVDPPRKGCDPALLETIIEMQPRRVVYVSCNPATLARDLRVLEDGGYRTVEVQPVD
MFPHTVHVESVALLVRDGVES
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacagaagcggcccgccccccgcggggagggccggaaaccggcaggagcccgt
cgctcgggagaggccggcgggagccgggcttatgaagccggcctgccggtgaagaagaac
gaagactacgaagcggacattatcgggttgggacacgacggagaaggggtaggccgggtt
aacggctttaccctttttatacatggggccctgccgggtgagcgcgtgcgcgtgaaggtc
gtgaagttgaaaaagcagtacggctacggcaagctcctcgaggtgctcgaggccagcccc
gaccgcagcgcgcccccttgcccgatctacagccagtgcggcggctgccagctgcagcac
ctgagctacgaggcccagctgaagtggaagcggcagagcgtcatcgacagcctggagcgg
atcgggaagctggtggtttgctgtagcggcagaggcgcggatgtgctggtgggggaagcg
gatttggttggtggtagtgaggacgctgaggcaggtggagaagaagatagggctggaaag
acggccggaaagacagatggagaggcagcaggccctagggctcgggaacattcggtttcc
gttgaagtcactggggccggagtaaacggggacccttccgaacgcggcatcgtggtccac
ccgaccattggtatggacgagccttggcgctaccgcaacaaggcccaggttccattcggc
tgggcggaaggcggcctcgtcgggggtttctatgcccagggcagccaccggatcgtcgac
atggacagctgcctcatccagcatgaggccaacgatgatgtcgtgcgcaaggtgaaggaa
atcggccgcaagctcggtattaccgcgtatgacgaagcctcacacgaaggcctgctgcgg
cacgtggtcgtcaagttcggcttccgcacgggcgacgtcatggtcgtcctcgtcaccaac
gggaacaaggttcctcacttggacgaatgggtgcgcgagatccgcgaagccgtgccgggc
gtgaagagcatctgccacaacgtcaatacgaaacggacgaacgttattttcggggactca
acaacagtcctgtggggcgatgagttcatctacgactacatcggcgacgtgaaattcgcc
atctcggcccgttccttctaccaggtcaacccggtccagaccgaggtgctgtaccgcacc
gccctggactacgcggctttgaccggcagcgagaatgtcatcgacgcctactgcggcatc
ggaacgatctcgctcttcctcgcacgccacgcgaagcaggtccgcggcgtcgagatcgtc
gccgaagccatcgccgacgcccgccgcaacgccgcgctgaatggtatcgccaacgtcgac
ttcgccgtcggcaaagccgaggaagtcatcccggcctggcgcgccgaagagggcctcgcc
cccgacatcatcgtcgtcgacccgccgcgcaaaggctgcgacccggcgctgctcgagacg
attatcgagatgcaaccgcggcgcgtggtgtacgtgtcgtgcaacccggccacgctggcg
agggatttgagggtgctggaggatggagggtaccgcacggtggaggttcagccggtggat
atgtttccgcatacggtgcatgtggagtcggtggctttgttggtgagggatggtgtagag
agctaa
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