Paenibacillus aurantius: MJA45_12540
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Entry
MJA45_12540 CDS
T09594
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
paun
Paenibacillus aurantius
Pathway
paun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJA45_12540 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paun03019
]
MJA45_12540 (rny)
Messenger RNA biogenesis [BR:
paun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MJA45_12540 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
MG280
Motif
Other DBs
NCBI-ProteinID:
WNQ14235
UniProt:
A0AA96LJ40
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Position
2764189..2765733
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AA seq
514 aa
AA seq
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MTTVIWAVVALVVGILLGAGIGYFIRKSLAEAKISSAEHAAEQIIENARKDAEALKKETV
LEAKDEVHKLRAEAEKDIRERRNETQRQERRLLQKEESLDKKLESLERKEEQMANKEKRI
DETQGQIDQLYRSQVAELERISGLTMEEAKSIILTNVEQEVRHEAAQLIKEIEQQAKEEG
DKKAREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLII
DDTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQA
TFEIGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLSGLMAGELGEDVTLAKRAGL
LHDIGKALDHEVEGSHVEIGVEIGKKYKEHPVVINSIASHHGDTEATSVIAMLVGAADAL
SAARPGARRETLETYIKRLERLEDISESFEGVEKSYAIQAGREIRVMVQPDKVDDTEAFR
LARDITKKIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgtcatctgggccgtggtcgctctcgttgttgggattcttcttggcgctggg
attgggtattttatccgcaaatctcttgctgaagcgaaaatttcgagtgcggaacacgcg
gccgaacagattattgagaacgccaggaaagatgccgaggcacttaagaaagaaacggta
ctcgaagccaaagacgaagtccacaagcttcgggccgaagctgaaaaagacattcgtgaa
cgtcggaatgaaacacaacgacaagaaagacgattgttgcaaaaagaggagtcgctggat
aaaaaattagaatctctggaacgcaaagaagaacaaatggccaacaaggagaagcggatc
gacgagacccaaggacaaattgatcagctttatcgcagccaggttgccgagttagagcgt
atttccggattgacaatggaagaagcgaagtccatcattctcaccaatgttgaacaggaa
gtccgtcatgaagcagcccaactgattaaagagattgaacagcaggctaaagaagaaggg
gacaagaaggccagagagatcattacgctagctatccagcgttgtgcagccgatcatgtt
gccgagacgacggtatccgtcgttacgctgcctaacgaagaaatgaagggcagaatcatc
ggtcgcgaaggacggaacatccgggctctggagacgctgaccggcatcgacctcattatc
gacgacacgccggaagccgttatcctctccggattcgatccgatccgccgcgaaatcgcg
cggacggccctggagaagcttgtggcggatggacgaatccatccggcacgaatcgaagag
atggtggagaaatcccggaaggaagtggacgaacgaatccgcgaatacggggaacaagcc
accttcgagatcggcgtacatggtctgcatcccgatcttatcaagatattgggaaggctc
aaattcagaaccagctatggacagaatgtgcttaagcattcgatggaagtggcttatctg
tcggggcttatggcaggagaacttggagaagacgttactttggcgaaacgtgccggactc
ctgcatgacatcggtaaagctttggatcacgaagtcgaaggctcccatgtggaaatcggc
gtagagatcggaaagaaatacaaagagcatccggttgtcatcaacagcattgcgtcgcac
catggagacaccgaggcgacttccgtcatcgcgatgctcgtgggtgctgcggacgcctta
tcggctgcaaggccgggggcccgccgcgaaacgctcgaaacgtacatcaagcggctggaa
agactggaggatatttcggaatccttcgaaggggtcgagaaatcgtacgccatccaggcc
ggccgtgaaatccgggttatggttcagccggacaaggtggatgacaccgaggcgttccgc
ttggcccgtgatattacgaagaaaatcgagaatgaattggattatcccggccacattaag
gttaccgttattcgcgaaacccgggctgtggaatacgctaaatag
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