Pistricoccus aurantiacus: FGL86_00655
Help
Entry
FGL86_00655 CDS
T06130
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
paur
Pistricoccus aurantiacus
Pathway
paur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FGL86_00655 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paur03400
]
FGL86_00655 (recB)
Enzymes [BR:
paur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FGL86_00655 (recB)
DNA repair and recombination proteins [BR:
paur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FGL86_00655 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEA37721
UniProt:
A0A5B8SN83
LinkDB
All DBs
Position
144150..147899
Genome browser
AA seq
1249 aa
AA seq
DB search
MNPVLLDPIEQPLIGSHLIEASAGTGKTFTIALLYLRLVLGPQDETDSANFPRPLTPPDI
LVVTFTNAATQELRERIRERLVEAALIFQEAQALDEGDPLARLRDSYPREHWPRCARRLQ
LAAQWMDEAAVSTIHSWCYRMLREHAFESGSLFALNLETDQSELEADVARDYWRSFYYPL
DRDGLGEILKHWKTPQELNADVLRLRDHRSLLSPAAPPDQIIAHTQRQTRQRLEALKAPW
PAWLDDLEAIFEEAAGRKAFKGQSFNSRSRAGWLGALRDWARDPEQIKPDLTEAARKRLT
PQGMAEIWQKGEPPSHPALAALEALPEELAALPDPHPALLAHAVHWMAARREQVQHRRAE
MNHQDLLTQLDRALVSPEGDRLAAQMRRQFPVALVDEFQDTDPIQYRLFDRVYRLEDNTT
DSLILLIGDPKQAIYGFRGADIHTYLQARQATKERLVTLGTNYRSSRALVEAVNRCFAFA
DAHPQGAFLFKGRDNNPLPFQPVAAKGRKDRLVQNGGPLPALTCWRLDALEPLSKTAYLN
EMSERCASHIAGLLNDRSAGFLEDDRLTPLAPSDLAVLVNSGNEASIVRNALDRRGIKSV
YLSDKESVFQSPACTELETWLRAVSVPENDRALRAALSTPSLGLSLTELDALNGAQGRHE
LAWEERVLQFRGYHRLWQRQGVLPMLRRLLADFDVAQRLLASTGGERQLTDLLHLGELLQ
EASQELDGEYALIRYLAEARAAPEQQEVHRQRLESDAALVQVITIHKSKGLEYPLVFLPF
IAGFRVKEKKDAPILWHDEQGRLQLALDGREEHQRELADRERLAEDLRKLYVALTRARHA
TWLGLAPLKEMHRGALGYLLAGGSPIVPEQFDELLQTLRGDCEAIHIAPAPTIEQRSVSR
QSQTTPLAPARRPTRPAREHWWIASYSALRLGAYSQVERSDAFTLLEPLGEEDSASPLAR
PEPTTPLEATTREMLDEPPEELAPPVQQTGLLHRFPRGPGPGTFLHGLLEWAGRQGFGRV
LDQPALMEDTLARRANLRGWSHWIPELRDWLLRLLDRTFPLPNGQRLRLAELECYQVEME
FWFATHRVDTQRLDALVSAHILPGQPRPVLEQDSLNGMLKGFIDLVFERDGRYYLLDWKS
NQLGPSDDAYTEDAMDQAVLDKRYDLQYCLYLLALHRLLKSRLGAGYDYKRHIGGVLYVF
LRGVDAPSAGLHRQCPPKALIEALDKLFRAPVDATTDSSYSSFRILQSE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgttcttctcgaccccatcgagcaacccctgatcggcagccacctgatcgag
gccagcgccggcaccggcaagacctttaccatcgcgctcctgtacctgcgtctggtgctc
ggcccccaagacgagacggacagcgccaactttccgcgccccctgaccccgccggacatt
ttagtcgtcaccttcaccaacgccgccacccaggaactacgggagcgcattcgcgagcgg
ctggtggaagccgccctgatctttcaggaagcgcaggccctcgacgagggcgacccgctg
gcacggctgcgggacagctacccccgggagcactggccgcgctgcgcgaggcggctgcag
ctcgccgcccagtggatggacgaggcggcggtctccaccatccacagctggtgctatcgc
atgctgcgggagcacgccttcgagagcggcagcctgttcgctctcaatctggagacggac
cagagcgagctggaggcggacgtcgcccgggactattggcgcagcttctattatcccctg
gatcgggacgggctcggcgagatcctcaagcactggaagaccccccaggaactgaacgcg
gacgtgctgcggctgcgggatcatcgctcgctactctccccggcggcgcccccggatcag
atcatcgcccatacgcaacggcaaacccggcaacgcctggaagcgctcaaggccccctgg
cccgcctggctcgacgatctggaagcgatcttcgaggaagccgccggccggaaagccttc
aagggccagagtttcaacagcagaagccgcgctggctggctgggggcgctgcgggactgg
gcgcgggacccggagcaaatcaagccagatctgacggaggcggcccggaagcgcctgacg
ccccagggcatggcggagatctggcagaaaggcgagccgccgagtcatccggccctggcc
gccctggaagcgctaccggaggagcttgctgccctgccggacccgcacccggcgctgctc
gcccatgcggtacactggatggcggcgcgccgggagcaggtgcagcaccgccgggcggag
atgaaccatcaggatctgctgacccagctggatcgcgccctggtcagcccggagggcgac
cgactggcggcgcagatgcggcgtcagtttcccgtggccctggtggatgagttccaggac
acggacccgattcagtatcggctcttcgaccgggtctaccggctggaagacaacaccacc
gacagccttatcctgctgatcggcgatcccaagcaggcgatctacggctttcgcggcgcg
gatatccacacctatcttcaggcccgacaagcgacgaaggaacggctggtcaccctgggc
accaactaccgctcaagtcgcgccttggtggaagcggtcaaccgctgcttcgccttcgcc
gacgcccatccccagggcgccttcctgttcaagggccgggacaacaacccgctgcccttc
cagccggtggccgccaagggccgcaaggatcggctggtgcaaaacggtggaccgctgccc
gccctgacctgctggcggctggacgccctggaacccctgagcaagaccgcctatctgaac
gagatgagcgagcgctgcgccagccatatcgccgggctgctcaacgaccggagcgccggc
tttctagaggacgaccggctcacgcccttggccccctcggacctggcggtgctggtcaac
agcggcaacgaggccagcatcgttcgcaacgccctggaccggcgcggcatcaagagcgtc
tatctctcggacaaggagagcgtctttcaaagccccgcctgcacggagctggaaacctgg
ctgcgggcggtgagcgtaccggagaacgaccgcgccctgcgcgccgccctgtccaccccc
agtttgggactgagcctcacggaactcgacgccctgaacggcgcccaaggtcgtcacgag
ctggcctgggaggagcgggtgctgcagtttcgcggctatcaccggctctggcagcgccag
ggagtgctgcccatgctgcgccggctgctggcggatttcgacgtggcccagcggctgctg
gcaagcaccggcggcgagcgccaactgacggatctcctgcacctcggggagctgctgcag
gaagccagccaggagctggacggggaatacgcgctgattcgctacctggcggaggcccgg
gccgcgccggagcagcaggaggtgcaccgtcagcgtctggaaagcgacgcggcgctggtg
caggtgatcaccattcacaaatccaaggggctcgagtatccgctggtcttcctgcccttt
atcgccggctttcgggtcaaggagaagaaggacgcccccatcctctggcacgacgagcaa
ggccgcctgcagctggccctggacggccgggaggagcatcagcgggaactggcggaccgg
gagcggctggcggaggacctgcgcaagctctacgtcgccctgacccgggcgcgccacgcc
acctggctgggcctggcgccgctcaaggagatgcaccggggcgccctgggatatctgctg
gccggcggcagtcctatcgttccggaacagttcgacgaactgctgcagaccctgcgcggg
gattgcgaggccatccatatcgcgccggcgccgaccatcgagcagcgcagcgtctcccgg
cagtcgcagacgacgcccctggccccggcccgccgacctacgcgccccgctcgggagcac
tggtggatcgccagctattccgccctgcgcctgggcgcctattcgcaagtggagcgcagc
gacgcctttaccctgctcgaacccctgggggaagaggattcagccagccccctcgcccga
cccgaacccaccacgcccctggaagccaccacccgggaaatgctcgacgagccgccggaa
gaactcgcgccgccggttcagcaaaccggtttattgcatcgctttccccgcggacccggg
cccggcaccttcctgcacggtctgctggaatgggcggggcgccagggttttggccgggtg
ctcgaccagccggcgctgatggaggataccctggcccgccgggccaacctgcggggctgg
agtcactggattccggagctgcgggactggttgcttcgcctgctcgaccgcacctttccg
cttccgaacggtcagcgtctgcgcctggcggaactggagtgttatcaggtggagatggag
ttctggttcgccactcatcgggtggatacccagcgcctggacgccctggtcagcgcccat
atcctgcccggccagccgcgcccggtgctggagcaggacagcctcaacggcatgctcaag
ggttttatcgacctggtgttcgaacgggacggccgctactacctgctggactggaaatcc
aaccagctggggccgagcgacgacgcctataccgaggacgccatggatcaggcggtgctg
gacaagcgctacgacctgcaatattgcctctatctgctggcgctgcatcggctgctcaag
tcgcggctgggcgcgggttacgactataagcgccatatcggcggggtgctgtatgtcttc
ctgcgcggtgtcgacgcccccagcgccgggctgcaccggcagtgcccgcccaaggcgttg
atcgaagcgctggataaactgtttcgcgctcccgtcgatgcgacgactgatagcagctac
agctccttccgaatcttgcagagtgagtaa
DBGET
integrated database retrieval system
