Pistricoccus aurantiacus: FGL86_02510
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Entry
FGL86_02510 CDS
T06130
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
paur
Pistricoccus aurantiacus
Pathway
paur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FGL86_02510 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paur03021
]
FGL86_02510 (rpoC)
03400 DNA repair and recombination proteins [BR:
paur03400
]
FGL86_02510 (rpoC)
Enzymes [BR:
paur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FGL86_02510 (rpoC)
Transcription machinery [BR:
paur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FGL86_02510 (rpoC)
DNA repair and recombination proteins [BR:
paur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FGL86_02510 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Biotin_lipoyl
DUF3150
Motif
Other DBs
NCBI-ProteinID:
QEA38059
UniProt:
A0A5B8SLT2
LinkDB
All DBs
Position
complement(529466..533683)
Genome browser
AA seq
1405 aa
AA seq
DB search
MKDLVKVLKSQAQSEEFDAIKITLASPDMIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRMKHRGIICEKCGVEVTKAAVRRERMAHIELASPVAHIWFLKSL
PSRIGMFLDMTLRDIERVLYFESFVVIDPGMTTLERGQLLNDEQYFEALEEFGDDFDARM
GAEAVQALLKDVDLEEEIERLREEIPQTNSETKIKKLSKRLKLLEAFYKSGNAPAWMVME
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIYSKLQSSGQASTIKAAKKMVERELPEVWDILADVIREHP
VLLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMATNNVLSPANGDPIIVPSQDVVLGLYYMTREKINAKGEGMVFSDLKEVERAFGTQ
SVSLHARVKVRLTEYTSEEEGGELIEKTSIHDTTVGRALLFSILPKGAPFALVDQPMKKK
AISGLINEVYRRTGLKDAVIFADQLMYTGFRLATWSGASIGVNDFVIPEEKKGIVDAAED
EVKEIEDQFSSGLVTAGEKYNKVIDIWSKANDKVAKAMMAGISKETVIDRDGKEVEQDSF
NSVFIMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDMVITEADCGTEEGLTLHPVIEGGDIIVSLAQRV
LGRVVAQDVISPADDEVLIPRGTLLDEAWCARLDTMGIDEIVVRSTINCETAHGVCSSCY
GRDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRASAMDSVQVKHGGRVR
LHNIKSVERADGKLVVVSRSSALAVADEHGREREYYKLPYGAELSVKDGDAVEASQTVAK
WDPHTHPIVAEAEGKVQYIDMDEGLSIHRSVDEMTGLSSIEVIESAARPATGRDKRPMIM
LTDEAGEHVAISGSNTPVQYLLPGKAIVSVDNGATIGIGEVVARIPVEASANRDITGGLP
RVADLFEARKPKESSILAEISGVISFGKETKGKRRLTITPESGDPFEMLIPKWRQVAVFE
GETVEKGEVISDGPSNPHDILRLLGVAELAKYITAEVQEVYRLQGVGINDKHIEVIVRQM
LRKVEITEAGDSSFIPGDQIELVRVLEENARLAEQDKFPAKYQRLLLGITKASLATESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLTHHAERHRKRGDADRAL
QPSAFDVEQELGAQLTALDADDDES
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttggtgaaagtcctcaaatcccaggcccagtccgaagagttcgatgcgatc
aagatcacgctcgcatccccggacatgattcgttcctggtcctacggcgaggtcaagaag
cccgagaccatcaactaccggaccttcaagccggaacgcgacggtctgttctgtgccaag
atctttggcccggtcaaggattacgagtgcctgtgcggcaagtacaagcgcatgaaacac
cgcggtatcatctgtgaaaagtgcggcgtcgaagtcaccaaggccgcagtgcgccgggag
cgcatggcgcatatcgagctggcctcgccggtggcgcacatctggtttttgaagtcgctg
ccctcgcgtatcggcatgttcctcgacatgaccctgcgggacatcgagcgggtgctgtat
ttcgagagcttcgtggtgatcgatccgggcatgaccaccctggagcgtggacagctgctc
aacgacgagcagtacttcgaggcgctggaagagttcggcgacgacttcgatgcccgcatg
ggcgccgaggcggtgcaggcgctgctcaaggacgtggatctggaagaggagatcgagcgt
ctgcgagaagagattccccagaccaactccgaaaccaagatcaagaagctctccaagcgc
ttgaagctgctggaagccttctacaagtccggcaacgcaccggcctggatggtcatggag
gtgctgccggtgctaccgccggatctgcgccccttggtaccgctggatggcggacgcttc
gcgacctcggatctcaacgatctgtatcgccgggtgatcaaccgcaacaatcgtctgaag
cgcctgctggatctcaacgcgccggatatcatcgtgcgcaatgaaaagcgcatgctgcag
gagtccgttgacgcactgctggacaacggccgtcgtgggcgagcgatcactggctccaac
aagcgcccgctcaagtccttggcggacatgatcaagggcaagcaagggcgtttccgacag
aacctgctgggcaagcgggtcgattattccggtcgttcagtcattaccgtgggcccgact
ctgcgtctgcatcagtgcggtctgcccaagaagatggcgctggagctgttcaagccgttc
atctattccaagctgcagtccagcggccaggcgtccaccatcaaggccgcgaagaagatg
gtcgaacgggaactgccggaggtctgggacattctcgcggacgtgattcgcgagcacccg
gtgctgctgaaccgggcgccgaccctgcaccgtctgggcatccaggccttcgagccgctg
ctgatcgaaggcaaggccatccagcttcatccgctggtatgcgccgcctacaacgcagac
ttcgacggcgaccagatggcggtacacgtgccgctgaccctggaagcccagctcgaggcc
cgggcgctgatgatggccaccaacaacgtgctgtcaccggctaacggcgacccgatcatc
gtgccctcacaggacgtggtgctggggctttactacatgactcgggaaaagatcaacgcc
aagggcgaaggcatggtgttctccgacctcaaggaggtggagcgcgccttcggcacccag
agcgtgtccctgcatgctcgggtcaaggtgcgcttgaccgagtatacgtcggaagaggaa
ggcggcgagctgatcgagaagacctcgattcacgacaccaccgtgggccgggcgctgctg
ttcagtattctgcccaaaggtgcgccctttgccctggtggatcagccgatgaagaagaag
gcgatctccgggctgattaacgaggtctatcgacgcaccgggctgaaggatgcggtcatc
ttcgccgaccagttgatgtacaccggttttcgtctggcgacctggtccggtgcctccatc
ggtgtcaacgatttcgtcatcccggaggagaagaaaggcatcgtcgatgcggccgaggat
gaggtcaaggaaatcgaggatcagttctcttccgggcttgttaccgccggcgagaagtac
aacaaggtcatcgatatctggtccaaggccaacgacaaggtggccaaggcgatgatggcg
ggcatttccaaggaaaccgtgattgaccgcgacggcaaggaggtcgagcaggattccttc
aacagcgtgttcatcatggcggactccggcgctcggggcagcgcggcgcagattcgtcag
ctcgccggcatgcgcggcctgatggccaagccggacggctcgatcatcgagacaccgatt
accgccaatttccgtgaaggcctgaacgtgcttcagtacttcatttctacccacggggcg
cgtaaaggtctggcggacacggcgctcaagaccgccaactctggttatctgacccgacga
ctggtggacgttgcacaggacatggtgatcaccgaggcggactgcggtaccgaggaaggc
ttgaccctgcatccggtcatcgagggtggcgatatcatcgtttccctggcgcagcgagtg
ctgggtcgcgtagtggcccaggacgtgatcagcccagcggacgatgaagtcctgattcct
cgcggtaccctgctggacgaggcctggtgtgcgcgcctcgataccatgggaatcgacgag
atcgtggtgcgcagcaccatcaactgcgagaccgctcacggcgtctgttcctcttgctac
ggtcgcgatctggcccgaggtcatcaggtcaatatcggtgaagcggtaggggtcattgcc
gcccagtccatcggtgagccgggtacccagctgaccatgcggaccttccatatcggtggg
gcagcatctcgggcctccgccatggatagcgttcaggtcaagcatggtggcagggtacga
ctgcacaacatcaagtccgtggagcgcgccgacggcaagctggtggtggtgtcccgctcc
agcgccctggcagtggcggacgagcatggacgcgagcgggagtattacaagcttccttac
ggtgccgagttgtccgtcaaggacggtgacgcggtagaggccagccagaccgtggccaag
tgggatccgcatactcacccgatcgtcgccgaagcggaaggcaaggtgcagtacatcgat
atggacgaagggctttccatccaccgcagtgtggatgaaatgaccggcctgtcttccatc
gaggtcatcgagtccgccgcccgccccgccacggggcgcgacaagcgtccgatgatcatg
ctcaccgacgaggccggtgagcatgtggcgatctccggctccaacacgccggtccagtat
ctgctgcctggcaaggcgatcgtttccgtggataacggcgcgaccatcggtatcggcgag
gtagtggcgcggattccggtagaggcgtccgctaaccgtgacatcaccgggggtctgccg
cgggtagcggatctgttcgaggcgcgtaagcccaaggagtcctcaatcctcgctgaaata
agtggcgtgatcagcttcggcaaggaaaccaagggcaagcgccgtctgacgatcacgccg
gaatccggcgatcccttcgagatgctgattcctaagtggcgtcaggtggcggtcttcgag
ggcgaaaccgtcgagaagggcgaagtgatttccgatgggccgagcaatcctcacgacatc
ctgcggctgctgggagtggcggagctggccaagtacatcaccgccgaggtgcaggaggtc
tatcgactgcagggcgtgggcatcaacgacaagcacatcgaagtgatcgtgcgacagatg
ctgcgcaaggtggagattaccgaggcgggagattccagcttcattcccggcgatcagatc
gaactggtgcgggtgttggaagaaaacgcccggctggcggagcaggataagttcccggcg
aaataccagcgcctattgctgggtatcaccaaggcgagcctggccaccgaatcattcatc
tccgccgcctccttccaggagacgactcgagtgctgacggaagcggcggtcaccggcaag
cgcgactatctgcgtggcttgaaagagaacgtcgtggtcggtcgcctgatcccggcagga
accggcctgacccaccacgcggagcgccatcgcaagcgcggggatgcggatcgtgcgctg
cagccctccgccttcgacgtcgagcaggaactgggtgcccagttgaccgccctggacgcg
gatgacgacgaaagttga
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integrated database retrieval system
