Pistricoccus aurantiacus: FGL86_02515
Help
Entry
FGL86_02515 CDS
T06130
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
paur
Pistricoccus aurantiacus
Pathway
paur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FGL86_02515 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paur03021
]
FGL86_02515 (rpoB)
03400 DNA repair and recombination proteins [BR:
paur03400
]
FGL86_02515 (rpoB)
Enzymes [BR:
paur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FGL86_02515 (rpoB)
Transcription machinery [BR:
paur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FGL86_02515 (rpoB)
DNA repair and recombination proteins [BR:
paur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FGL86_02515 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QEA38060
UniProt:
A0A5B8STC6
LinkDB
All DBs
Position
complement(533787..537863)
Genome browser
AA seq
1358 aa
AA seq
DB search
MAYSYTEKKRIRKDFGKLPQVMDVPYLLAIQLDSYYDFLQQDRAPDERLDTGLNAAFKSV
FPIESFSGNAALEYVSYRFGTPAFDVKECQLRGVTYSAPLRVKVRLIIYDRESSNKAIKD
IKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKSHSSGKLLYSARV
IPYRGSWLDFEFDPKDNVFVRIDRRRKLPATVLLRALGLSAEEILDTFFVTSVFHIEKSG
FSVDLVPSRLRGETATFDIKDADGSEIVAEGRRITQKHIRQMEKSGLERLEVPMDYLYGK
TLAKDQIDPNTGELICECNTEITPELLEKLATAGITTLETLYTNDLDCGPFISDTLKLDT
TRSALEALVEIYRMMRPGEPPTKEAAETLFNNLFFSEDRYDLSGVGRMKFNRRLRRESDT
GSGVLDNQDILDVLKELISIRNGFGDVDDIDHLGNRRIRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGP
GGLTRERAGFEVRDVHTTHYGRLCPIETPEGPNIGLINSLATYSHTNSYGFLETPYRKVV
DSLVTDEVVQLSAIEEGDFVIAQASATVDENGRLVDDLVQVRHRGETTFTGPDKVTLMDV
SPRQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERFVARDSGVC
AVARRGGLIDSVDAKRIVVRVNEDEIIGGEAGVDIYNLTKYTRSNQNTCMNQRPVVRPGD
EVARGDILADGPSVDMGDLALGQNMRIAFMPWNGYNFEDSILLSERVVEEDRFTTIHIQE
LTCVSRDTKLGSEEITADIPNVGESALSKLDEAGVVYIGAEVGPGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRAPTGMKGTVIDVQVFTRDGVEKDSRALSIEQTQLDE
VRKDLQETYRIAEDATFERLKRTLSGQPVNGGPKLKKGDVLSNDYLDELPRQQWFKLRLQ
DEALNELLAQADEQLENRRKEMDERFEDKKRKLTQGDDLAPGVLKIVKVYMAVRRRIQPG
DKMAGRHGNKGVISAIMPIEDMPFDEQGEPVDVVLNPLGVPSRMNVGQVLETHLGMAARG
LGMKIERMLREAREQQIVQIREFLGEIYNTQGTRKEALDSLSDDEIVTLARNLQGGVPMA
SPVFDGADEHEIKHLLKLADLPESGQMTLYDGRTGEAFDRQVTVGYMYMLKLNHLVDDKM
HARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGRTK
MYKSIVDGDHTMQAGMPESFNVLVKEIRSLGIDIELEG
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatacactgagaaaaaacgcatccgcaaggatttcggcaaactgccccaa
gtgatggatgtgccttacctgctggccatccagcttgactcctactacgacttcctgcag
caggatcgtgcgccggacgagcggcttgacaccggtctgaatgctgctttcaagtccgta
ttcccgatcgaaagcttctccggcaatgccgctctcgaatatgtcagctatcgtttcggc
acgccggccttcgatgtcaaggaatgtcagctgcgcggggtcacttattccgcgcccctg
cgcgtcaaggtgcgcctgatcatctacgatcgtgagtcctccaacaaggcgatcaaggat
atcaaggagcaggaagtctatatgggggaaatccccctgatgaccgagaacggcaccttt
gtcatcaatggtaccgaacgtgtcatcgtatcccagttgcaccgctcgccgggagtgttc
ttcgatcacgacaagggcaaaagccattcttccggcaagcttctgtattccgcgcgggta
attccttaccgtggctcctggctcgacttcgagttcgatcccaaggataacgtcttcgtg
cgtatcgatcgccgccgcaagctgccggccacggtactgctgcgcgccttggggctgagc
gcggaagagattctcgataccttcttcgtcaccagcgtctttcatatcgagaaatccggc
ttctccgtagatcttgtgccgtcgcgtctgcggggtgaaactgccaccttcgacatcaag
gatgcggacggttcggagatcgtcgcggaaggccgaaggatcactcagaagcatattcga
cagatggaaaaatccggcctcgagcgtctcgaagtgccgatggattatctttacggcaag
acgctggccaaggatcagatcgatccaaacaccggtgaactgatttgcgagtgcaacacg
gaaatcacgccggaactgctggagaaactggccacggcgggtattaccactctcgagacg
ctatataccaacgatctcgactgtggtcccttcatttccgataccctgaagctcgacacc
acccgctccgccctagaggcgctggtggagatctatcgcatgatgcgccccggcgagccg
cccaccaaggaagctgccgagacgctattcaacaacttgttcttctccgaggaccgctac
gatctgtccggcgtcggacgcatgaagttcaaccgtcgtctgcgccgtgaatccgacacc
ggttccggggtgctggataatcaggacatccttgacgtgctcaaggaattgatcagtatc
cgtaacggttttggcgatgtcgatgacatcgaccacctgggcaaccgtcgtatccgctgt
gttggcgagatggcggagaatcagttccgtgtcggcctggtacgggtcgagcgggccgtc
aaggaacgtctctctatggcggagagcgaaggcctcatgcctcaggatctgatcaacgcc
aagccggtggcggcggcggtcaaggagttctttggctccagccagctgtcccagttcatg
gaccagaacaatccgctgtccgaggtcactcacaagcgtcgggtttccgcgcttgggccg
ggtggcctgacccgcgagcgtgcaggcttcgaagtgcgtgatgttcataccacgcactac
ggtcgcctgtgtccgatcgagacgccggaagggccgaacatcggcctgatcaactctctg
gcgacctacagtcataccaacagctatggtttcctcgagacgccctatcgcaaggtggtg
gacagtctcgtcaccgatgaagtggtacagctatcggccatcgaagaaggcgattttgtc
atcgctcaggcctccgccaccgtggacgaaaatggccgcctggtggacgatctggtgcag
gtccgtcaccgaggcgaaaccactttcacggggccggacaaggtcaccctgatggacgtg
tcaccgcgccaggtggtatccgtggccgcggccttgattccgttcctggagcacgacgat
gccaaccgcgctctgatgggggcgaacatgcagcgtcaggcggtgcctaccctgcgggcg
gacaagccgctggtgggcaccggcatggagcgtttcgtggcccgggattccggcgtctgt
gcggtggcgcgccgtggcggcctgatcgattccgtggatgccaagcggatcgtggtacgg
gtcaacgaggatgagatcatcggcggcgaggccggggtcgacatctacaatctgaccaag
tacacccgctccaaccagaacacctgcatgaaccagcgccccgtggtacgccccggtgac
gaggtggcgcgaggcgatattctggcggacgggccctccgtcgacatgggggatctggcg
ctgggtcagaacatgcgcatcgccttcatgccctggaacggctacaacttcgaggactct
atcctgctttccgagcgggtggtggaggaagaccgtttcaccacgattcacatccaggaa
ctgacctgcgtctctcgggacaccaagctgggatcggaagagatcaccgcggacattccc
aatgtgggtgagtccgctctgtccaagctagatgaggcgggggtggtgtatatcggtgcg
gaagtcggccccggcgacatcctggtaggcaaggtcacccccaagggcgagactcagctg
acccctgaggagaagctgctgcgagcgatcttcggcgagaaagcgtctgacgtgaaagac
acttctctgcgcgcacccaccggtatgaaggggacggtcatcgatgtgcaggtgttcacc
cgcgatggtgtcgagaaggattcccgagcgttgtccatcgagcagacccagctcgacgag
gtgcgcaaggaccttcaggaaacctatcgcatcgcggaagacgccactttcgagcgtctc
aagcgtaccttgagcggccagccggtcaacggtgggcccaagctcaagaaaggtgacgtg
ctcagcaatgactacctggacgaactgccgcgacagcagtggttcaagctgcgcctgcag
gatgaagcgctcaacgagctgcttgctcaggcggacgaacagctcgaaaaccgtcgcaag
gaaatggatgagcgtttcgaggacaagaagcgcaagctgacccagggcgacgacctggcg
ccgggtgtgctcaagatcgtcaaggtctacatggcggtacgtcggcgtatccagcccggt
gacaagatggcgggtcgtcacggcaacaagggcgtcatctcggcgatcatgcctattgag
gacatgcccttcgacgaacagggcgagccggtggatgtggtgctcaacccgctcggggta
ccctcgcgcatgaacgtcggacaggttctcgagacccatctgggcatggccgctcgcggt
ctgggcatgaagatcgagcgcatgctgcgggaggctcgcgaacagcagatcgttcagatc
cgcgaattcctcggcgaaatctacaacacccagggaacgcgaaaagaagcgctcgattcg
ctctctgacgacgagatcgtcactctggcgcgtaacctgcagggcggtgtgccgatggca
tcaccggtcttcgatggtgccgacgagcacgagatcaagcatctgctcaagcttgccgat
ctgcctgaatctggccagatgacgctttacgacggacgtaccggtgaagctttcgatcgt
caggtcaccgttggctacatgtacatgctcaagctcaaccacctggtggatgacaagatg
cacgcccgttccaccggctcctattccctggtgacccagcagccgctgggcggcaaggca
cagttcggtggtcagcgcttcggcgagatggaggtctgggcgctggaagcttacggcgcg
gcttacactcttcaggagatgctcacggtcaagtccgacgacgtggaagggcgcaccaag
atgtacaagagcatcgtggatggcgaccacaccatgcaggcgggcatgccggagtccttc
aacgtgctggtgaaggaaattcgttcgctgggcattgatatcgagctagaaggctaa
DBGET
integrated database retrieval system
