Pistricoccus aurantiacus: FGL86_04040
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Entry
FGL86_04040 CDS
T06130
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paur
Pistricoccus aurantiacus
Pathway
paur03420
Nucleotide excision repair
paur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGL86_04040 (uvrD)
03430 Mismatch repair
FGL86_04040 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paur03400
]
FGL86_04040 (uvrD)
Enzymes [BR:
paur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGL86_04040 (uvrD)
DNA repair and recombination proteins [BR:
paur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGL86_04040 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FGL86_04040 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_22
DEAD
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QEA38324
UniProt:
A0A5B8SQ50
LinkDB
All DBs
Position
complement(844023..846227)
Genome browser
AA seq
734 aa
AA seq
DB search
MDDVTAILDHLNPAQREAVSAPQGNMLVLAGAGSGKTRVLVHRIAWLLRTEGLSPYAILA
VTFTNKAAKEMRTRLEALLGLSLRNIWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRMLKEHSIDDERFPPRQVQYFISGCKEEGLRHFQVQTHGDAYLTQMVELYERYQL
NCERGGLVDFGELLLRSLELLRDNPALLAHYQERFAHVLVDEFQDTNTLQYAWLKLITGQ
RIPMTVVGDDDQSIYGWRGARVENIQRFEDEFPDTRTVRLEQNYRSTSAILDAANALIDH
NTGRMGKALWTAGDKGDPISVYAGFNDLDEARFIVDTLKEKIDEGFHRREIAILYRSNAQ
SRVLEETLIRQGMPYRIYGGQRFYERLEIKNALAYLRLLLNRDDDASLERVINVPARGIG
TRSVEVLRNRARSENLSLWQAAEACLADGTLKGRAATAVKGFIELIERLDNDTAGMMLHE
IVTHVLEITGLIEHHRNEKGEKGQARVENLEELVNAARAFVQGEVMEQEIGEGAAALEPF
LSEAALNAGDHEADEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSLEEPGRLEE
ERRLCYVGLTRAMKKLYLTYAELRRLHGKETFQRASRFLRELPEELLEEVRLRGQISRPV
SANRPATGLSRQSSVGGEGDLPTLSLGQRVSHPLFGEGVILNAEGSGERARVQVSFEGEG
DKWLVLGFAKLTPL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgattctcgatcatctcaacccggcccagcgggaggcggtgagt
gccccccaaggcaacatgctggtgctggccggcgccggttccggcaagacccgggtgctg
gtgcatcgcatcgcctggctcctgcggaccgaaggcctttctccctacgcgatcctcgcg
gtgaccttcaccaacaaggccgccaaggagatgcgtacccgcctggaagcactcttgggc
ctgtccctgcgcaatatctgggtgggcaccttccactccatcgcccaccggctgctgcgc
acccactggcaggacgcccggctaccccagcatttccagatcatcgattccgacgatcag
ctgcggctggtcaagcgcatgctcaaggagcattccatcgacgacgagcgcttcccgccg
cgtcaggtgcaatacttcatttccggctgcaaggaggaagggctgcgccatttccaggtg
cagacccacggcgacgcctacctcacccagatggtcgagctctacgagcgctatcagctg
aactgcgagcgcggtggactggtggacttcggtgagctgctgctgagaagcctcgagctg
ctgcgggacaatcccgccctgctggcccactatcaggagcgcttcgcccacgtgctggtg
gatgagttccaggacaccaacaccctgcagtacgcctggctcaaacttatcaccggccag
cgcattccgatgaccgtggtgggggacgacgatcagtcgatctacggctggcgcggggcc
cgggtcgagaatattcagcgcttcgaagatgaattccccgataccaggaccgtgcgcctg
gaacagaactaccgctccaccagcgcgattctcgacgccgccaacgccctgatcgaccac
aacacggggcgcatgggcaaggcgctgtggaccgcgggagacaagggcgatcccatttcc
gtctacgccggcttcaacgacctggatgaagcccggtttatcgtcgataccctcaaggag
aagatcgacgagggctttcatcgccgggagatcgccattctctatcgctccaacgcccag
tcccgggtgctggaggaaaccctgatccgccagggaatgccttaccgcatctacggcggt
cagcgcttctacgagcgcctggagatcaagaacgccctggcctatctacgtctgctgctc
aaccgggacgacgatgcttccttggaaagggtgatcaacgtacccgcccggggtatcggc
acccgcagcgtggaagtgctgcggaatcgcgcccgcagcgagaatctctccttgtggcag
gcggcggaagcctgtctggcggacggtaccctgaagggccgcgccgccaccgcggtcaag
ggcttcatcgagctgatcgaacgcctggacaacgacaccgccggcatgatgctccacgag
atcgtcacccatgtgctcgagatcactggcctgatcgagcatcatcgcaacgagaagggg
gagaagggccaggcccgggtcgagaacctggaggaactggtcaacgccgcccgggccttc
gtgcagggcgaggtgatggagcaggagatcggcgaaggcgccgcggccctggagccgttt
ctctccgaggcggcgctcaacgccggcgaccacgaggcggacgagttcgaggatagcgtg
cagctgatgaccctgcactccgccaagggcctggagtttccggtggtgttcattgccggg
gtggaggagggtctgttcccccacaagatgtccctggaggaacccgggcgtctggaagag
gagcgccggctctgctacgtgggcctgacccgggcgatgaagaagctctacctgacctac
gcggaactccgccgcctgcacggcaaggaaacctttcagcgcgcctcccgcttcctgcgg
gaactgccggaggaactgctcgaggaagtgcgcctgcggggacagatttcccgcccggtc
agcgccaatcgcccggcgacggggctatcccgccagtcgagcgtcggcggcgaaggcgat
ctgcctaccctgtccctgggccaacgggtcagccatccgctgttcggcgaaggggtgatc
ctcaacgcggaaggcagcggcgagcgcgcccgggtgcaagtcagtttcgaaggcgaaggc
gacaaatggttagtactgggctttgccaagctgacgccgctttga
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