Pistricoccus aurantiacus: FGL86_06710
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Entry
FGL86_06710 CDS
T06130
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paur
Pistricoccus aurantiacus
Pathway
paur03030
DNA replication
paur03430
Mismatch repair
paur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGL86_06710 (dnaE)
03430 Mismatch repair
FGL86_06710 (dnaE)
03440 Homologous recombination
FGL86_06710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paur03032
]
FGL86_06710 (dnaE)
03400 DNA repair and recombination proteins [BR:
paur03400
]
FGL86_06710 (dnaE)
Enzymes [BR:
paur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGL86_06710 (dnaE)
DNA replication proteins [BR:
paur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FGL86_06710 (dnaE)
DNA repair and recombination proteins [BR:
paur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FGL86_06710 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QEA38797
UniProt:
A0A5B8SS35
LinkDB
All DBs
Position
1386233..1389727
Genome browser
AA seq
1164 aa
AA seq
DB search
MSFVHLRVHTEYSLVDGLVRLKPLVKRSAALGLPALAVTDETNLFGLVKAYKAAQGTGLK
PVIGADFWLDNPGDEGRPYRLTLLAMDNQGYRNLTELISRCWMEGQRLGRALLKKEWVFA
QSEGLIALSGGREGEIGRHLLTDHQAQARTLLEEWRDHFSGRFYLELIRTGRPEEEDCLH
LSVTLAEEMNTPVVATNDVRFLAREDYWAHETRVAVGEGKALDDPRRENRYSEEQYLKSP
EEMAELFADIPEALENSVMIAARCNVELRLGEYFLPEYEIPEGMTLDEFFRQVSHDGLTK
RLDKLFPAACHPRESEDWQSTEKLYRERLDFELNIILQMGFPGYFLIVMDFIQWAKDNDV
PVGPGRGSGAGSLVAYALQITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEKRDSVID
YVASRYGRDAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLTKAID
QEPALKEFLDSDEEAQEIWEMALQLEGITRGTGKHAGGVVIAPTKLTDFSPLLCDEHGNG
LVVQFDKNDVEEAGLVKFDFLGLRTLTIIDWALEMVDKVRGAAGEAPLDITGIPLDDAPT
FAMLKKAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINRKH
GRAELAYPHPDYQHELLKPVLEPTYGIILYQEQVMQIAQVMAGYSLGQADLLRRAMGKKK
PEEMAKQRAGFMEGCAENGIDKDLAGNLFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKA
HYPGPFMAAVLSTEMDNLDKVVPLIEECRHLGLTVTPPDVNMGGYKFSVDEEGRVVYGLG
AIRGVGEGPIGAIVEARGADGPFEDLFDFCRRVDPRRLNKRTLEALIRSGALDSLGPSRA
VLAAALEDALKAAAQNHANQSLGMLDMFGEAFVDTAEEDAYAEYRGAREWSDKQRLSGEK
DTLGLYLTGHPIDEYEQELSRFVATRIADLKPSRESQRVAGLVVASRTMKSKRGDTMAFL
TLDDRTGRIEASLFGEIYERLRGQLSEDQVLIVEGEVASDDYSGGLRLRGKEVTLMVEAR
ARFAQAVELSLDGARANGGLIDSLRHSLASFQDSEGLPVRLRYRNARAAGWLELSEDWKV
APSDALLGALREVEGQDGVRLKYR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtgcatcttcgcgttcataccgagtattccctggtcgatggcctggtgcgg
ctcaagccgctggtcaagcgaagcgcggcgctcggcctgccggctctggcggtgacggac
gagaccaacctgttcggtctggtcaaggcctacaaggcggctcaggggacgggtctcaag
ccggtgattggcgcggatttctggctcgacaatcccggcgacgagggccgcccttaccgg
ctgacccttctggccatggacaatcagggctatcgcaacctcacggaactgatttcccgc
tgctggatggaaggccagcggctgggccgggcgctgctcaagaaggaatgggtgttcgcc
cagagcgaggggctgatcgcgctttccgggggccgggaaggggagatcggtcgccatctg
ctgacggatcatcaggctcaggcgcgaaccctgctcgaggaatggcgcgaccatttctcc
ggacgtttctacctggaactgatccgcaccggacgaccggaggaagaggactgcctgcat
cttagcgtcaccctggcggaagagatgaataccccggtggtggccaccaacgacgtgcgc
tttcttgcacgggaagactactgggcccacgagacccgggtcgccgtcggcgaaggcaag
gccctggacgatcctaggcgggagaaccgctacagcgaagagcagtacctgaaaagcccg
gaggaaatggcggagctgttcgcggacattcccgaagcgctggaaaacagcgtgatgatc
gccgcccgttgcaacgtcgagctgcgcctgggggaatacttcctgccggagtatgaaatc
cccgagggcatgaccctggacgagttcttccgccaggtgtctcacgacggcctgacaaag
cgtctggacaagctgtttcccgccgcgtgccatccccgggagagcgaggactggcagtcc
acggaaaagctctatcgggagcgcctggatttcgagctgaacatcatcctgcagatgggc
tttcccggctacttcctgatcgtcatggacttcattcagtgggccaaggacaacgacgtg
ccggtggggccggggcgcggctccggcgccgggtcgctggtggcctacgcgctgcagatc
acggatctcgaccctttggaatacgatctgctcttcgagcgcttcctcaatccggagcga
gtgtccatgccggacttcgatgtggacttctgcatggagaagcgcgacagcgtcatcgat
tacgtggccagccgctacggtcgcgacgcggtttcccagatcgtcaccttcggcaccatg
gccgccaaggcggtggtgcgggacgtggcccgggcccagggcaagccctattccctgggg
gacaagctctccaagctgattcccttcgaggtgggcatgacgctcaccaaggctatcgac
caagagccggcgctcaaggaatttctcgattccgacgaagaggctcaggaaatctgggag
atggccctgcagctcgaaggcatcacccgaggcaccggcaagcacgccggcggcgtggtg
atcgcccctaccaagctcacggatttctcgccgctgctttgcgatgagcacggcaacggt
ctggtggtgcagttcgacaagaatgacgtggaagaggccggcctggtcaagttcgacttc
ctggggctgcgtactctgaccatcatcgactgggccctggagatggtcgacaaggtgcgg
ggggcggcgggagaagcgcccctggatatcaccggcattcccctggacgacgcccccacc
ttcgccatgctcaagaaggcggagaccaccgcggtgttccagctggaatcccggggcatg
aaggagttgatcaagcgcctgctgccggattccctggaggacatgatcgccctggtggcg
ctgtttcgcccgggaccgctgcagtccggcatggtggacgacttcatcaaccgcaagcac
ggccgtgcggaactggcctatccccacccggactatcagcacgagctgttgaagccggtg
ctcgagcccacctacggcatcatcctgtatcaggagcaggtgatgcagatcgcccaggtg
atggcgggctacagcctgggccaggcggatctgctgcgccgggccatgggcaagaagaag
ccggaggagatggccaagcagcgcgctggcttcatggaaggctgcgccgaaaacggcatc
gacaaggatctggcggggaacctcttcgatctggtggagaagtttgccggctacggcttc
aacaagtcccactccgccgcctatgccctggtctcctatcaaaccgcctggctgaaagcc
cattatcccgggcctttcatggcggcggtgctgtccacggagatggacaatctggacaag
gtggtgcccttgatcgaggagtgccgccacctggggctgacggtgacgccgccggacgtc
aacatgggcggctacaagttcagcgtcgacgaggagggtcgggtcgtctacggcctgggg
gcgattcgcggggtgggggaaggccccatcggcgccatcgtcgaggcccgcggcgcggac
ggccccttcgaggacctgttcgatttctgtcgccgggtcgatccgcgccggctcaacaag
cgcaccctggaagccctgattcgctccggtgccctggacagcctggggccgagccgcgcg
gtgctggcggcggcgctggaggatgccttgaaggcggcggcccagaatcacgccaaccag
agcctgggcatgctggacatgttcggcgaggccttcgtcgataccgccgaggaggacgcc
tacgcggagtatcgcggcgctcgcgagtggtcggacaagcagcgcctatccggggagaaa
gataccctggggctctatctcaccggccatcccatcgacgagtacgaacaggaactctcg
cgcttcgtcgccacccgcatcgcggatctcaagccgtctcgggaatcccagcgagtggcg
gggctggtggtggcgagccgcaccatgaagtccaagcgcggcgacaccatggcttttctc
accctggacgaccgcaccgggcgtatcgaggcgtccctgttcggcgagatctacgaacgg
cttcgcggacagctttccgaagatcaggtgctgatcgtcgagggggaggtggcaagcgac
gactattccggcggcctgcggctgcgaggcaaggaggtcaccctgatggtcgaggcccga
gcaagattcgcccaggcggtggaactcagcctggacggcgcccgggccaacggcggcctg
atcgacagcctgcgccacagcctcgcttcctttcaggacagcgaaggactgccggtgcgg
ctcaggtatcgcaacgctcgggccgcgggctggctcgagctttccgaggattggaaggtg
gcccccagcgacgccctgctcggtgcgctcagggaagtggaaggacaggacggcgtgaga
ctcaagtaccgctag
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