Pistricoccus aurantiacus: FGL86_10865
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Entry
FGL86_10865 CDS
T06130
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
paur
Pistricoccus aurantiacus
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paur03016
]
FGL86_10865 (rnd)
Enzymes [BR:
paur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FGL86_10865 (rnd)
Transfer RNA biogenesis [BR:
paur03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FGL86_10865 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Myb_Cef
Motif
Other DBs
NCBI-ProteinID:
QEA39527
UniProt:
A0A5B8SU57
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All DBs
Position
2270045..2271172
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AA seq
375 aa
AA seq
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MSLDLDIRWIDTPQALDAACRALSQADTLAMDTEFFRESTFYPVPALIQLYGGGPVYLID
PQAVKATQALRELLASGPLKLLHASSEDLEVMRIWADVAIAPVMDTQLAQALLGEDPAMS
YQRLVERWTGEVLPKDETRSDWLERPLSDSQQRYAAWDVVYLLDAWRAQRKALEGSGRLT
WLEEDCHTLGIQEEGNAANGQWYLRQRQLWRLSPRQIEAYQRLTQWRETEVRRRNLPRGW
LINDKLLYEIAERMPKNKTLLADIQGLKPALIKREGDTLLALVEQARQQAQEELPAPLPS
PMTPAFKKRLKALKQVVAAEAETLGLAPEVLMRRRDLEALVGASLLDAPLPLPRGWRGER
LAQPLANALKEVATT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgacctcgatattcgctggatcgatacccctcaagcgctggatgccgcctgt
cgagcactcagtcaggccgataccctggccatggacacggagttctttcgcgaatccacc
ttctacccggtacccgcgctgatccagctatacgggggtggcccggtgtacctgatcgat
cctcaggcggtaaaagcgacacaggccctgcgcgagctgttggcttccggccccctgaaa
ctgctgcacgccagcagtgaagacctggaggtcatgcgcatctgggccgatgtggcgatt
gctcccgtgatggacacccagctggcccaggcgcttcttggggaagacccggccatgagc
tatcagcgtctggtggagcgctggaccggcgaagtgttgcccaaggacgaaactcgctcc
gattggctggagcgcccgctttccgactctcagcagcgctatgcggcctgggacgtggtg
tatctgctggacgcctggcgggctcagcgcaaggcactcgagggctccggtcggctgacg
tggctggaagaagactgtcacacgctcggcattcaggaagagggcaacgcagcgaatgga
caatggtatctgcgccagcgtcagctgtggcggctatctccccgtcagatagaggcctac
cagcgtctgacacagtggcgagaaacggaagttcgccgacgcaacctgccacgcggctgg
ctgatcaacgacaaactactctatgaaatcgctgagcgaatgcccaaaaacaaaaccctg
ctggcggatatccaagggctcaagcccgcgctgatcaaacgcgagggagacacgctgctg
gccttggttgaacaggcacgccagcaggcgcaggaggagctgccggcgccactgccttct
cccatgacgccagcgttcaagaagcgtctcaaggcgctcaagcaggtcgtcgccgctgaa
gctgaaacgctggggctggcgccggaggtcttgatgcgacgccgggaccttgaagcgctg
gtgggagcgagcctgctggatgcgccgttaccgttgcctcgaggctggcggggcgagcgt
ctggcccaacccttggcgaatgcattgaaagaggtcgccactacatga
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