Pistricoccus aurantiacus: FGL86_11530
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Entry
FGL86_11530 CDS
T06130
Name
(GenBank) RNA polymerase sigma factor
Organism
paur
Pistricoccus aurantiacus
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Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
TPR_21
TPR_2
Motif
Other DBs
NCBI-ProteinID:
QEA39639
UniProt:
A0A5B8SR47
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Position
complement(2421765..2423054)
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AA seq
429 aa
AA seq
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MTDQELGATIEAIWRIESARVVAGVARLTHDLDQAEDFAQDALLAALEAWPSRGLPDNPG
AWLMTAAKRRALDHLRHQTMAAPKHVELARELDAHHALAEQVFAERIDAALDDDIDDDVL
RLLFTACHPILSPDARAALTLKVVGGLTTQEIARAYLRPETTIAQRIVRAKRTLLEAHVP
FEVPEGAALAARLASVLEVIYLIFNEGYAATAGDHWTRPEWCDEALRLGRVLTGLMPEES
EVHGLTALMEIQASRLPARVDTNGDPILLPDQDRSRWDRLLIRRGLAALERAEALPGVLG
PYTLQAAIAACHARAAVYEKTDWPRIAALYEALVQIAPSPVVALNRAVAVGMAFGPAAGL
ELVDALLTEPTLAHYHLLPSVRGDLLARLDRIPEARAEFERAATLTRNGRERALLLARAA
ACTVKRRRS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaccaggagcttggcgcgaccatcgaggcgatctggcgcatcgaatcggccaga
gtcgttgccggggtcgcgcgtctgacccacgacctggaccaggcggaggactttgcccag
gacgccctgcttgccgcactggaagcctggcccagcagggggcttcccgacaatcccggt
gcctggctgatgaccgcggccaagcgtcgggcgctcgatcatctgcgccaccagaccatg
gccgcgcccaagcatgtggaactcgcccgggagctggatgcccaccacgccttggccgag
caggtcttcgccgaaaggatcgatgccgcgctggacgacgacatcgacgacgacgtcttg
cgcttgctctttaccgcctgccacccgattctgtccccggatgcgcgggccgccctgacg
ctgaaggtggtcggcggcctcaccacgcaggagatcgcccgggcctatctcaggcccgag
acgaccatcgcccagcgcatcgtgcgcgccaagcgcaccctgcttgaagcgcacgtcccc
ttcgaggtgccagagggcgcggcactggcggcccgactcgcctcggtgctcgaggtcatc
tacctgatcttcaacgagggctatgcggccaccgccggcgaccactggacacgacccgaa
tggtgcgacgaggcgctacgcctgggccgggtgctgaccggtttgatgccggaggagagc
gaggtgcacggcctgacggcactgatggagatccaggcctcgcgcctgcccgcccgggtg
gatacgaacggcgaccccatcctgctgccggatcaggaccgtagccgctgggatcggctg
ctgattcgccgcggcctggccgccctcgaacgcgccgaagccctgcccggtgtgcttggc
ccctataccctgcaagccgccatcgccgcctgccacgcccgggccgcggtctacgagaaa
accgactggccgcgcatcgccgcgctctacgaggccctcgtccagatcgcgccctcgccg
gtggtggcgctgaaccgtgccgtcgccgtcggcatggccttcgggccggcggcggggctg
gaactggtcgatgccttgctcacggagccgacgctggcgcactaccatctgctgcccagc
gtgcgcggcgacctgctcgcccgactcgaccgcatccccgaggcccgcgccgagttcgaa
cgcgccgccacccttacccgcaacggccgggaacgcgccctgctgctggcacgggcggcg
gcatgtacggtaaaacggcgacgatcctaa
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