Pistricoccus aurantiacus: FGL86_12140
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Entry
FGL86_12140 CDS
T06130
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
paur
Pistricoccus aurantiacus
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paur03032
]
FGL86_12140
03036 Chromosome and associated proteins [BR:
paur03036
]
FGL86_12140
03400 DNA repair and recombination proteins [BR:
paur03400
]
FGL86_12140
DNA replication proteins [BR:
paur03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FGL86_12140
Chromosome and associated proteins [BR:
paur03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FGL86_12140
DNA repair and recombination proteins [BR:
paur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FGL86_12140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QEA39747
UniProt:
A0A5B8SUM6
LinkDB
All DBs
Position
complement(2579288..2579584)
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AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELPVKQVETAVRIILDDITEALAEGGRVEIRGFGSFSLHYRDPRT
GRNPKTGDPVELDGKYVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttgatcgagcagatcgccatgcgccagcctgagctgccggtcaag
caagtcgaaaccgcggtacgtatcattcttgacgatattactgaagcgttggccgaaggc
gggcgtgtggaaattcgcggtttcggtagtttttcactgcattatcgtgatcctcgaaca
ggacgcaatccaaaaaccggtgatcccgtcgaactagacggaaaatatgttccccacttc
aagccgggtaaagagttacgcgaacaagtcgatgccagccgtgcgcttggctattaa
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